RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 PPIBP23284 216 aaKnown RBP6.96□□□□□ -1.3
CLCN3-208ENST00000512813 MADCAM1Q13477 382 aa6.96□□□□□ -1.3
CLCN3-208ENST00000512813 KLF5Q13887 457 aaPredicted RBP6.96□□□□□ -1.3
CLCN3-208ENST00000512813 DEFB135Q30KP9 77 aa6.96□□□□□ -1.3
CLCN3-208ENST00000512813 GFOD2Q3B7J2 385 aa6.96□□□□□ -1.3
CLCN3-208ENST00000512813 NRMQ8IXM6 262 aa6.96□□□□□ -1.3
CLCN3-208ENST00000512813 LINC00471Q8N535 108 aa6.96□□□□□ -1.3
CLCN3-208ENST00000512813 MINDY2Q8NBR6 621 aa6.96□□□□□ -1.3
CLCN3-208ENST00000512813 OR2T10Q8NGZ9 312 aa6.96□□□□□ -1.3
CLCN3-208ENST00000512813 C11orf45Q8TAV5 145 aa6.96□□□□□ -1.3
CLCN3-208ENST00000512813 GPX7Q96SL4 187 aaPredicted RBP6.96□□□□□ -1.3
CLCN3-208ENST00000512813 RGCCQ9H4X1 137 aa6.96□□□□□ -1.3
CLCN3-208ENST00000512813 NRIP3Q9NQ35 241 aa6.96□□□□□ -1.3
CLCN3-208ENST00000512813 MRPL22Q9NWU5 206 aaKnown RBP6.96□□□□□ -1.3
CLCN3-208ENST00000512813 ZNF107Q9UII5 783 aaPredicted RBP6.96□□□□□ -1.3
CLCN3-208ENST00000512813 PIGLQ9Y2B2 252 aa6.96□□□□□ -1.3
CLCN3-208ENST00000512813 TRAV41A0A0B4J266 112 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 TMEM82A0PJX8 343 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 LGALS9O00182 355 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 CDC42EP2O14613 210 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 ATP6V0E1O15342 81 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 IGHV3-11P01762 117 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 ANXA2P07355 339 aaKnown RBP6.95□□□□□ -1.3
CLCN3-208ENST00000512813 CSN3P07498 182 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 CTRB1P17538 263 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 GPX2P18283 190 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 KRT4P19013 534 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 CX3CR1P49238 355 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 MFAP2P55001 183 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 PRKCDQ05655 676 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 TNP2Q05952 138 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 KPNB1Q14974 876 aaKnown RBP6.95□□□□□ -1.3
CLCN3-208ENST00000512813 CEACAM21Q3KPI0 293 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 UTF1Q5T230 341 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 CTRB2Q6GPI1 263 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 LYPD4Q6UWN0 246 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 PRSS45Q7RTY3 260 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 OR8H1Q8NGG4 311 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 OR9G1Q8NH87 305 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 TAMM41Q96BW9 452 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 SNX22Q96L94 193 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 DGCR6LQ9BY27 220 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 EGLN3Q9H6Z9 239 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 SRA1Q9HD15 236 aaKnown RBP6.95□□□□□ -1.3
CLCN3-208ENST00000512813 ZNF319Q9P2F9 582 aa6.95□□□□□ -1.3
CLCN3-208ENST00000512813 ZNF878C9JN71 531 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 J3QT63 122 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 SOX15O60248 233 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 TXNDC12O95881 172 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 HLA-DQA2P01906 255 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 P0DMU3 169 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 FAM231AP0DMU4 169 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 FAM231CP0DMU5 169 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 RPS27P42677 84 aaKnown RBP6.94□□□□□ -1.3
CLCN3-208ENST00000512813 P2RX3P56373 397 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 TAF13Q15543 124 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 GRK1Q15835 563 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 ZBED5Q49AG3 693 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 CEP78Q5JTW2 689 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 C1orf134Q5TEV5 83 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 KRT74Q7RTS7 529 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 C11orf65Q8NCR3 313 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 OR5A2Q8NGI9 324 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 FRZBQ92765 325 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 OR10A2Q9H208 303 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 TAS2R3Q9NYW6 316 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 ENPP5Q9UJA9 477 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 COPS3Q9UNS2 423 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 CORO2BQ9UQ03 480 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 POLDIP2Q9Y2S7 368 aa6.94□□□□□ -1.3
CLCN3-208ENST00000512813 IGHV4-4A0A075B6R2 117 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 TRGV10A0A0A0MS01 117 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 TRBV5-3A0A0A0MS03 114 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 IGHV3-72A0A0B4J1Y9 119 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 C11orf94C9JXX5 98 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 J3QR06 171 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 RIPK2O43353 540 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 NDUFB2O95178 105 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 PSKH1P11801 424 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 IDO1P14902 403 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 PEX2P28328 305 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 ERP29P30040 261 aaKnown RBP6.93□□□□□ -1.3
CLCN3-208ENST00000512813 KIR2DS2P43631 304 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 POLR2JP52435 117 aaKnown RBP6.93□□□□□ -1.3
CLCN3-208ENST00000512813 ERVK11-1P61568 191 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 ZNF816Q0VGE8 651 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-208ENST00000512813 CD300EQ496F6 205 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-208ENST00000512813 C19orf54Q5BKX5 351 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 FAM57BQ71RH2 274 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 DCXRQ7Z4W1 244 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 BATF2Q8N1L9 274 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 CASTOR1Q8WTX7 329 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 SLAMF6Q96DU3 332 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 BARHL1Q9BZE3 327 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 NSRP1Q9H0G5 558 aaKnown RBP6.93□□□□□ -1.3
CLCN3-208ENST00000512813 C11orf68Q9H3H3 251 aaKnown RBP6.93□□□□□ -1.3
CLCN3-208ENST00000512813 RANGRFQ9HD47 186 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-208ENST00000512813 PARP11Q9NR21 331 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 SLC7A11Q9UPY5 501 aa6.93□□□□□ -1.3
CLCN3-208ENST00000512813 SH3GLB1Q9Y371 365 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms