RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 MNDAP41218 407 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 SNU13P55769 128 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 LCN1P1Q5VSP4 162 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 TMEM42Q69YG0 159 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 ADAMTSL5Q6ZMM2 481 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 LCNL1Q6ZST4 164 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 OVCH2Q7RTZ1 564 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 RTN4RL2Q86UN3 420 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 BBS1Q8NFJ9 593 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 OR8U1Q8NH10 309 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 CADM1Q9BY67 442 aaKnown RBP10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 MROQ9BYG7 248 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 PKIBQ9C010 78 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 MTCH1Q9NZJ7 389 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 SCOCQ9UIL1 159 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 UBE2J1Q9Y385 318 aaPredicted RBP10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 SMAD5-AS1Q9Y6J3 95 aa10.41□□□□□ -0.74
POLR2J3-216ENST00000511773 PRR32B1ATL7 298 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 BUB1B-PAK6H3BSN5 160 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 DLGAP1O14490 977 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 PSPNO60542 156 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 IGLV1-47P01700 117 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 TTRP02766 147 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 RPLP1P05386 114 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 MRPL3P09001 348 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 CALCBP10092 127 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 GDNFP39905 211 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 P2RX3P56373 397 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 HES1Q14469 280 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 HLA-DRB5Q30154 266 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 ZNF829Q3KNS6 432 aaPredicted RBP10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 ZNF260Q3ZCT1 412 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 SLX4IPQ5VYV7 408 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 OR52W1Q6IF63 320 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 CCDC144NLQ6NUI1 221 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 SLC35E3Q7Z769 313 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 EGFL6Q8IUX8 553 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 C5orf56Q8N8D9 126 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 OR56B4Q8NH76 319 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 EMG1Q92979 244 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 NIPSNAP1Q9BPW8 284 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 DGCR6LQ9BY27 220 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 GAL3ST2Q9H3Q3 398 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 DCLRE1BQ9H816 532 aa10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 NUFIP1Q9UHK0 495 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-216ENST00000511773 SORL1Q92673 2214 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 TRGV10A0A0A0MS01 117 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 H3BSH0 61 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 CCDC22O60826 627 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 HNF4GQ14541 408 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 MICAQ29983 383 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 UTF1Q5T230 341 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 BCL2L15Q5TBC7 163 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 SLC25A26Q70HW3 274 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 CPOQ8IVL8 374 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 STPG2Q8N412 459 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 COMMD1Q8N668 190 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 ITFG2Q969R8 447 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 CREB3L1Q96BA8 519 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 DNAJB9Q9UBS3 223 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 IKZF2Q9UKS7 526 aa10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 SAMHD1Q9Y3Z3 626 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-216ENST00000511773 LINC01548A6NM66 108 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 LY6LH3BQJ8 138 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 SIRPB1O00241 398 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 MGST3O14880 152 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 PRODHO43272 600 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 HSD17B1P14061 328 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 TMEM11P17152 192 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 OR3A1P47881 315 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 KPNB1Q14974 876 aaKnown RBP10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 TEX38Q6PEX7 206 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 DEGS2Q6QHC5 323 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 CYP2R1Q6VVX0 501 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 HEPN1Q6WQI6 88 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 PLEKHG7Q6ZR37 379 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 FOXRED2Q8IWF2 684 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 DRAM1Q8N682 238 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 TOMM40LQ969M1 308 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 RPEQ96AT9 228 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 CMTM5Q96DZ9 223 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 YIPF3Q9GZM5 350 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 ZMAT4Q9H898 229 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 RBFOX1Q9NWB1 397 aaKnown RBP10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 ING3Q9NXR8 418 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 SLC7A11Q9UPY5 501 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 V9GYS6 101 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 HYDINQ4G0P3 5121 aa10.38□□□□□ -0.75
POLR2J3-216ENST00000511773 IGKV1-27A0A075B6S5 117 aa10.37□□□□□ -0.75
POLR2J3-216ENST00000511773 LOC110117498-PIK3R3F6TDL0 507 aa10.37□□□□□ -0.75
POLR2J3-216ENST00000511773 FRMD6-AS1P0C7T7 363 aa10.37□□□□□ -0.75
POLR2J3-216ENST00000511773 NFYBP25208 207 aa10.37□□□□□ -0.75
POLR2J3-216ENST00000511773 RIDAP52758 137 aaKnown RBP10.37□□□□□ -0.75
POLR2J3-216ENST00000511773 PRRX1P54821 245 aa10.37□□□□□ -0.75
POLR2J3-216ENST00000511773 ZNF91Q05481 1191 aa10.37□□□□□ -0.75
POLR2J3-216ENST00000511773 APOFQ13790 326 aa10.37□□□□□ -0.75
POLR2J3-216ENST00000511773 GINS1Q14691 196 aa10.37□□□□□ -0.75
POLR2J3-216ENST00000511773 CXorf66Q5JRM2 361 aaPredicted RBP10.37□□□□□ -0.75
POLR2J3-216ENST00000511773 ZNF679Q8IYX0 411 aa10.37□□□□□ -0.75
POLR2J3-216ENST00000511773 OR10G2Q8NGC3 310 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms