RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 RFT1Q96AA3 541 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 SNX22Q96L94 193 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 METTL8Q9H825 291 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 ZMAT3Q9HA38 289 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 HMG20AQ9NP66 347 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 FKBP14Q9NWM8 211 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 IL36RNQ9UBH0 155 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 ZNF281Q9Y2X9 895 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 A0A0U1RQK1 487 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 SULT1B1O43704 296 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 KDM4BO94953 1096 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 MELTFP08582 738 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 OCM2P0CE71 109 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 OCMP0CE72 109 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 SOX2P48431 317 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 UBE2E1P51965 193 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 ERVFRD-1P60508 538 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 ZP1P60852 638 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 GUCA2AQ02747 115 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 BLMHQ13867 455 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 C6orf141Q5SZD1 244 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 C12orf54Q6X4T0 127 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 ZSCAN4Q8NAM6 433 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 EMG1Q92979 244 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 SLC25A28Q96A46 364 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 NEK6Q9HC98 313 aa13.2□□□□□ -0.3
PDLIM5-216ENST00000511767 ERICH4A6NGS2 130 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 HAND1O96004 215 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 ALDOBP05062 364 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 LMO1P25800 156 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 DLX6P56179 175 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 RPS11P62280 158 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 ACTG1P63261 375 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 KLRD1Q13241 179 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 MED21Q13503 144 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 PNKDQ8N490 385 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 NANOGP1Q8N7R0 232 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 OR51A2Q8NGJ7 313 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 TSEN15Q8WW01 171 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 SMIM19Q96E16 107 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 AJUBAQ96IF1 538 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 VCXQ9H320 206 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 RHOFQ9HBH0 211 aa13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 SF3B6Q9Y3B4 125 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-216ENST00000511767 TRBV5-5A0A0J9YX44 114 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 A0A1W2PRD5 423 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 A0A1W2PRF3 423 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 A0A1W2PRM7 423 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 C17orf98A8MV24 154 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 NPFFO15130 113 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 PSPNO60542 156 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 GPX5O75715 221 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 TMEM225BP0DP42 221 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 CCL3L1P16619 93 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 PRKACAP17612 351 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 RAB3AP20336 220 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 EEF1B2P24534 225 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 IER3P46695 156 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 DOC2BQ14184 412 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 ZNF273Q14593 569 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 RNLSQ5VYX0 342 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 NCR3LG1Q68D85 454 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 ASCL4Q6XD76 172 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 OR8H2Q8N162 312 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 STX19Q8N4C7 294 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 TMEM86BQ8N661 226 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 ASCC1Q8N9N2 400 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 OR4S1Q8NGB4 309 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 OR5D18Q8NGL1 313 aa13.18□□□□□ -0.3
PDLIM5-216ENST00000511767 ANK2Q01484 3957 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 A0A1W2PPH5 198 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 SH2D1BO14796 132 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 HCKP08631 526 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 CFPP27918 469 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 AQP4P55087 323 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 ACSM1Q08AH1 577 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 AWAT1Q58HT5 328 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 SPIN3Q5JUX0 258 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 Q6P435 159 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 AHSA2Q719I0 299 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 GDPD3Q7L5L3 318 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 LDLRAD3Q86YD5 345 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 ZFP41Q8N8Y5 198 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 Q8NFD4 153 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 PXT1Q8NFP0 134 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 TAF15Q92804 592 aaKnown RBP eCLIP13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 TMEM106AQ96A25 262 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 PGLYRP3Q96LB9 341 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 HEXA-AS1Q9H8Q6 139 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 TAS2R4Q9NYW5 299 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 GLS2Q9UI32 602 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 GSTK1Q9Y2Q3 226 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 FAM96BQ9Y3D0 163 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 POMT1Q9Y6A1 747 aa13.17□□□□□ -0.3
PDLIM5-216ENST00000511767 A0A0G2JK05 382 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 PTGES3LE9PB15 166 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 CD1AP06126 327 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 CD2P06729 351 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 ZNF728P0DKX0 622 aa13.16□□□□□ -0.3
PDLIM5-216ENST00000511767 IGFBP3P17936 291 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms