RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 FRZBQ92765 325 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 FGGYQ96C11 551 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 C16orf74Q96GX8 76 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 MAGEB18Q96M61 343 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 AMDHD1Q96NU7 426 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 ZIM3Q96PE6 472 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 IL4I1Q96RQ9 567 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 PELOQ9BRX2 385 aaKnown RBP2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 NIPSNAP3BQ9BS92 247 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 ROPN1BQ9BZX4 212 aaPredicted RBP2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 NMUR2Q9GZQ4 415 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 ABCB10Q9NRK6 738 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 PLSCR3Q9NRY6 295 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 B3GNT2Q9NY97 397 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNRD1Q9P1U0 126 aa2.42□□□□□ -2.02
TOPBP1-208ENST00000511439 APOBP04114 4563 aaKnown RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 IGHV1-69DA0A0B4J2H0 117 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 TCRBV4S1A1TA0A5B7 111 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF705EA8MWA4 302 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 C9JVG2 144 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 E7ESA3 106 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 CCL22O00626 93 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 ACOX3O15254 700 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 RNF13O43567 381 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 UGT2B11O75310 529 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 UPK3AO75631 287 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 OTCP00480 354 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 IGHV1-69P01742 117 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 CRYGBP07316 175 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 CECR9P0C854 216 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 UBTFL6P0CB48 400 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 SMIM10L1P0DMW3 83 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 IMPDH1P20839 514 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 HIST1H1TP22492 207 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 CALCRP30988 508 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 OTX1P32242 354 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 STX17P56962 302 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 CARD18P57730 90 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 RGS8P57771 180 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 STXBP1P61764 594 aaKnown RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 TBPL1P62380 186 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 CCL8P80075 99 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 TGM3Q08188 693 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 BIKQ13323 160 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 TRIP13Q15645 432 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 XKR7Q5GH72 579 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 OR4F3Q6IEY1 312 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 CEMP1Q6PRD7 247 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 CCDC80Q76M96 950 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 PPP1R27Q86WC6 154 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 PDZD9Q8IXQ8 264 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 SLC38A6Q8IZM9 456 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 CLEC4FQ8N1N0 589 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 OR2M3Q8NG83 312 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 OR4D5Q8NGN0 318 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 TCTEX1D2Q8WW35 142 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 RPL3LQ92901 407 aaKnown RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 APH1AQ96BI3 265 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 EFHD2Q96C19 240 aaPredicted RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 NEURL3Q96EH8 262 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 PAGE5Q96GU1 130 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 SMIM10Q96HG1 83 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 TECTBQ96PL2 329 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 MCHR1Q99705 422 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF649Q9BS31 505 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 SLC35A5Q9BS91 424 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 SRXN1Q9BYN0 137 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 MRPL37Q9BZE1 423 aaKnown RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 NAT10Q9H0A0 1025 aaKnown RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 DSN1Q9H410 356 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 GLIPR2Q9H4G4 154 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 TMEM185BQ9H7F4 350 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 AUNIPQ9H7T9 357 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 NANOGQ9H9S0 305 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 PATZ1Q9HBE1 687 aaKnown RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 ANAPC11Q9NYG5 84 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 PEF1Q9UBV8 284 aaKnown RBP2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 ZNF639Q9UID6 485 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 KIAA2026Q5HYC2 2103 aa2.41□□□□□ -2.02
TOPBP1-208ENST00000511439 HEATR5BQ9P2D3 2071 aa2.4□□□□□ -2.02
TOPBP1-208ENST00000511439 IGHV1OR15-1A0A075B7D0 117 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 IGHV7-81A0A0B4J1V7 117 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 CENPVL3A0A0U1RRI6 287 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 A0A1B0GVL5 298 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 A0A1B0GWB2 263 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 SMCO3A2RU48 225 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 CCDC182A6NF36 153 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 OR6C70A6NIJ9 312 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 IQCF5A8MTL0 148 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 BTNL10A8MVZ5 291 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 C4orf51C9J302 202 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 SULT2B1O00204 365 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 FOXE1O00358 373 aaPredicted RBP2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 NBR2O15453 112 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 ERI3O43414 337 aaKnown RBP2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 OR1I1O60431 355 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 PAHP00439 452 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 LALBAP00709 142 aa2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 CA1P00915 261 aaPredicted RBP2.4□□□□□ -2.03
TOPBP1-208ENST00000511439 IGHG4P01861 327 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms