RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 LINC00114Q6XXX2 140 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 PRR18Q8N4B5 295 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 OR4S2Q8NH73 311 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 NIPSNAP1Q9BPW8 284 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 GFOD1Q9NXC2 390 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 A0A1W2PS29 197 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 SSNA1O43805 119 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 ZNF728P0DKX0 622 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 ZNF250P15622 560 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 LRRC75BQ2VPJ9 315 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 CATSPERDQ86XM0 798 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 Q8NA96 180 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 OR8B12Q8NGG6 310 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 DGCR14Q96DF8 476 aaKnown RBP8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 SLC35E1Q96K37 410 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 MED20Q9H944 212 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 K7N7A8 449 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 MITFO75030 526 aaPredicted RBP8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 TFAP2AP05549 437 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 H3F3AP84243 136 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 ZNF273Q14593 569 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 AP1ARQ63HQ0 302 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 LRRC28Q86X40 367 aaPredicted RBP8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 RNF138Q8WVD3 245 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 POM121L2Q96KW2 1035 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 PRSS27Q9BQR3 290 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 C20orf141Q9NUB4 165 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 A0A1W2PNU3 283 aaPredicted RBP8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 KISS1Q15726 138 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 SCGB2B2Q4G0G5 96 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 GLYATL3Q5SZD4 288 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 RELL2Q8NC24 303 aaPredicted RBP8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 ZNF426Q9BUY5 554 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 CCDC32Q9BV29 185 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 IKZF5Q9H5V7 419 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 SLA2Q9H6Q3 261 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 MSL2Q9HCI7 577 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 IGLV1-36A0A0B4J1U3 117 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 CLPSP04118 112 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 OPRL1P41146 370 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 RPS25P62851 125 aaKnown RBP8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 ANKRD55Q3KP44 614 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 CENPVQ7Z7K6 275 aaPredicted RBP8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 POC1AQ8NBT0 407 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 UXS1Q8NBZ7 420 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 DYNLRB2Q8TF09 96 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 RFT1Q96AA3 541 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 GINS3Q9BRX5 216 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 IDI2-AS1Q9NZ38 188 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 FBXO7Q9Y3I1 522 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 CDIPTO14735 213 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 IGKV3-15P01624 115 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 PDGFAP04085 211 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 IGFBP1P08833 259 aaPredicted RBP8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 MGMTP16455 207 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 SRMP19623 302 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 CD80P33681 288 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 ZNF45Q02386 682 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 FOXF2Q12947 444 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 GPR107Q5VW38 600 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 TCTEX1D2Q8WW35 142 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 TMEM203Q969S6 136 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 RHBDL2Q9NX52 303 aa8.29□□□□□ -1.08
POLR2J3-215ENST00000511313 MEIOCA2RUB1 952 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 SLC17A2O00624 439 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 TNFSF13O75888 250 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 TBX6O95947 436 aaPredicted RBP8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 MPV17P39210 176 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 AQP4P55087 323 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 OR1S1Q8NH92 325 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 STOML3Q8TAV4 291 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 BARD1Q99728 777 aaKnown RBP8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 PIKFYVEQ9Y2I7 2098 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 BORCS7-ASMTA0A0B4J1R7 106 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 IFNA17P01571 189 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 ISG15P05161 165 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 SLC2A2P11168 524 aaPredicted RBP8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 MVDP53602 400 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 CNIH2Q6PI25 160 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 H2BFWTQ7Z2G1 175 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 DTX2Q86UW9 622 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 NANOGP1Q8N7R0 232 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 CNIH3Q8TBE1 160 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 LINC00312Q9Y6C7 94 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 ZFHX2Q9C0A1 2572 aaPredicted RBP8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 GABRPO00591 440 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 WBP4O75554 376 aaKnown RBP8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 CAPNS1P04632 268 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 OR3A4PP47883 348 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 SWI5Q1ZZU3 235 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 SLC25A31Q9H0C2 315 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 SH3BGRL3Q9H299 93 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 HIF1ANQ9NWT6 349 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 TAS2R4Q9NYW5 299 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 EXTL2Q9UBQ6 330 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 JPT1Q9UK76 154 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 PCM1Q15154 2024 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 DPRXA6NFQ7 191 aa8.28□□□□□ -1.08
POLR2J3-215ENST00000511313 F5H5P2 479 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms