RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 USP43Q70EL4 1123 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 Q8IYB0 196 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 CMTM4Q8IZR5 234 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 Q8N7P7 452 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 ZDHHC22Q8N966 263 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 OR52N4Q8NGI2 321 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 MYDGFQ969H8 173 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 PGLYRP3Q96LB9 341 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 CNBD2Q96M20 576 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 TRBV23-1A0A0A0MS06 115 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 IGHV1-69DA0A0B4J2H0 117 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 TRBV5-5A0A0J9YX44 114 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 TMEM82A0PJX8 343 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 K7N7A8 449 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 KDM4BO94953 1096 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 ALX3O95076 343 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 IGHV1-69P01742 117 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 CHRM2P08172 466 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 CELP19835 753 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 TAS2R43P59537 309 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 ZP1P60852 638 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 RPL31P62899 125 aaKnown RBP11.48□□□□□ -0.57
DDX41-212ENST00000511040 BAMBIQ13145 260 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 EDDM3AQ14507 147 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 TUSC1Q2TAM9 212 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 DEFB112Q30KQ8 113 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 TMEM200BQ69YZ2 307 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 ZNF529Q6P280 563 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 FIP1L1Q6UN15 594 aaKnown RBP11.48□□□□□ -0.57
DDX41-212ENST00000511040 C9orf139Q6ZV77 190 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 PNKDQ8N490 385 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 KIR3DL3Q8N743 410 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 OR5M11Q96RB7 305 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 JMJD8Q96S16 334 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 GPER1Q99527 375 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 FAM192AQ9GZU8 254 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 CHST6Q9GZX3 395 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 HMG20AQ9NP66 347 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 GSTK1Q9Y2Q3 226 aa11.48□□□□□ -0.57
DDX41-212ENST00000511040 TRAV8-7A0A075B6U6 113 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 MAGEA13PA6NCF6 341 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 DNAJC9-AS1A6NH13 148 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 SIRPB1O00241 398 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 GABRPO00591 440 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 MAGEB3O15480 346 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 ZNF737O75373 536 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 CCL3L1P16619 93 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 GABRR1P24046 479 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 HSPA13P48723 471 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 EDDM3BP56851 147 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 PPP3R1P63098 170 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 SLC35A2P78381 396 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 SCN1BQ07699 218 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 YIF1BQ5BJH7 314 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 SAXO1Q8IYX7 474 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 TNFAIP8L1Q8WVP5 186 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 ZDHHC16Q969W1 377 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 C1orf147Q96MC9 270 aaPredicted RBP11.47□□□□□ -0.57
DDX41-212ENST00000511040 OR14A2Q96R54 314 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 MND1Q9BWT6 205 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 CDCA4Q9BXL8 241 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 FAM234AQ9H0X4 552 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 TNFRSF19Q9NS68 423 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 TPRKBQ9Y3C4 175 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 COL6A5A8TX70 2615 aa11.47□□□□□ -0.57
DDX41-212ENST00000511040 RNASEK-C17orf49H0YIS7 233 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 TRIM77I1YAP6 450 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 M0R1W7 72 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 PSPNO60542 156 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 VHLP40337 213 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 OR3A4PP47883 348 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 ERVFRD-1P60508 538 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 UBA52P62987 128 aaKnown RBP11.46□□□□□ -0.57
DDX41-212ENST00000511040 BLMHQ13867 455 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 ZNF273Q14593 569 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 IRF3Q14653 427 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 Q499Y3 187 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 DDI2Q5TDH0 399 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 RNLSQ5VYX0 342 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 C17orf107Q6ZR85 190 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 GDPD3Q7L5L3 318 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 ZSCAN4Q8NAM6 433 aaPredicted RBP11.46□□□□□ -0.57
DDX41-212ENST00000511040 OR4S1Q8NGB4 309 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 OR10K1Q8NGX5 313 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 SNX22Q96L94 193 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 NR1H4Q96RI1 486 aaPredicted RBP11.46□□□□□ -0.57
DDX41-212ENST00000511040 CCDC90BQ9GZT6 254 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 DUSP21Q9H596 190 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 EXOSC4Q9NPD3 245 aaKnown RBP11.46□□□□□ -0.57
DDX41-212ENST00000511040 TMEM138Q9NPI0 162 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 GLS2Q9UI32 602 aa11.46□□□□□ -0.57
DDX41-212ENST00000511040 LSM2Q9Y333 95 aaKnown RBP11.46□□□□□ -0.57
DDX41-212ENST00000511040 TRBV5-7A0A0A0MS05 114 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 A0A0U1RQK1 487 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 SH2D1BO14796 132 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 RGS10O43665 173 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 CDRT1O95170 752 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 OR2H2O95918 312 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 CRHBPP24387 322 aa11.45□□□□□ -0.58
DDX41-212ENST00000511040 BDKRB2P30411 391 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms