RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 TSTD3H0UI37 97 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 HSD17B6O14756 317 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 NUPL2O15504 423 aaKnown RBP2.82□□□□□ -1.96
NUP54-209ENST00000510569 SYNGR1O43759 233 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 RAD1O60671 282 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 CST8O60676 142 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 CLDN11O75508 207 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 CCNKO75909 580 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 DCTN3O75935 186 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 OR2B3O76000 313 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 OXSR1O95747 527 aaPredicted RBP2.82□□□□□ -1.96
NUP54-209ENST00000510569 HBE1P02100 147 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 MT-ND4P03905 459 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 CD5P06127 495 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 HIST1H1EP10412 219 aaKnown RBP2.82□□□□□ -1.96
NUP54-209ENST00000510569 ICAM2P13598 275 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 ADRB3P13945 408 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 ATP5A1P25705 553 aaKnown RBP2.82□□□□□ -1.96
NUP54-209ENST00000510569 HTR1FP30939 366 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 RFC3P40938 356 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 YAP1P46937 504 aaKnown RBP2.82□□□□□ -1.96
NUP54-209ENST00000510569 TFPI2P48307 235 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 HCAR3P49019 387 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 FBXW4P57775 412 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 TAS2R39P59534 338 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 RPL31P62899 125 aaKnown RBP2.82□□□□□ -1.96
NUP54-209ENST00000510569 SEMG2Q02383 582 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 ACVR1Q04771 509 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 UNC119Q13432 240 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 APOFQ13790 326 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 KIR2DS1Q14954 304 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 DUSP7Q16829 419 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 WHAMMP3Q1A5X7 153 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 TBC1D28Q2M2D7 210 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 TTLL9Q3SXZ7 439 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 KLHL12Q53G59 568 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 MED27Q6P2C8 311 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 CYHR1Q6ZMK1 362 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 Q6ZT83 130 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 MBOAT2Q6ZWT7 520 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 TSEN54Q7Z6J9 526 aaKnown RBP2.82□□□□□ -1.96
NUP54-209ENST00000510569 RALGPS2Q86X27 583 aaPredicted RBP2.82□□□□□ -1.96
NUP54-209ENST00000510569 HSD17B11Q8NBQ5 300 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 OR10W1Q8NGF6 305 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 OR1S2Q8NGQ3 325 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 OR51F2Q8NH61 342 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 COQ8AQ8NI60 647 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 LHFPL5Q8TAF8 219 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 OR5P2Q8WZ92 322 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 TMBIM1Q969X1 311 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 RERGQ96A58 199 aaPredicted RBP2.82□□□□□ -1.96
NUP54-209ENST00000510569 TESCQ96BS2 214 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 SFRP2Q96HF1 295 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 QKIQ96PU8 341 aaKnown RBP eCLIP2.82□□□□□ -1.96
NUP54-209ENST00000510569 OR5B12Q96R08 314 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 SEC22CQ9BRL7 303 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 ZNF670Q9BS34 389 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 APOOQ9BUR5 198 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 TMED9Q9BVK6 235 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 GLIPR2Q9H4G4 154 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 TMEM38AQ9H6F2 299 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 RDH14Q9HBH5 336 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 ACP6Q9NPH0 428 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 IFT46Q9NQC8 304 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 HRASLS2Q9NWW9 162 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 B3GNT2Q9NY97 397 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 LGALS13Q9UHV8 139 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 HHLA2Q9UM44 414 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 SLC22A7Q9Y694 548 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 NRCAMQ92823 1304 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 RTL9Q8NET4 1388 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 COL1A1P02452 1464 aaPredicted RBP2.82□□□□□ -1.96
NUP54-209ENST00000510569 DUOX1Q9NRD9 1551 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 CDK5RAP2Q96SN8 1893 aa2.82□□□□□ -1.96
NUP54-209ENST00000510569 MYH8P13535 1937 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 A0A1W2PRG6 482 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 TCRBV9S1A1TA0A576 114 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 EFCAB9A8MZ26 197 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 LINC00587B1AMM8 73 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 OR11H12B2RN74 326 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 H7C2Y5 167 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 CDIPTO14735 213 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 UBDO15205 165 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 PFDN6O15212 129 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 ARPC5O15511 151 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 PPIHO43447 177 aaKnown RBP2.81□□□□□ -1.96
NUP54-209ENST00000510569 CHP2O43745 196 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 CXCL13O43927 109 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 SOX15O60248 233 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 MPZL2O60487 215 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 MMP23AO75900 390 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 TDP2O95551 362 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 ATP6V1G2O95670 118 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 LSM8O95777 96 aaKnown RBP2.81□□□□□ -1.96
NUP54-209ENST00000510569 JCHAINP01591 159 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 RLN2P04090 185 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 PCCAP05165 728 aaPredicted RBP2.81□□□□□ -1.96
NUP54-209ENST00000510569 CST2P09228 141 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 OR8U9P0C7N5 309 aa2.81□□□□□ -1.96
NUP54-209ENST00000510569 LIMS3P0CW19 117 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms