RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ACER2Q5QJU3 275 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 B3GNTL1Q67FW5 361 aaPredicted RBP9.39□□□□□ -0.91
NEK1-206ENST00000510533 GFRALQ6UXV0 394 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 C9orf62Q8N4C0 152 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 LRRC29Q8WV35 223 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 RPEQ96AT9 228 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 COX14Q96I36 57 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 MIXL1Q9H2W2 232 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 ONECUT1Q9UBC0 465 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 ANXA10Q9UJ72 324 aa9.39□□□□□ -0.91
NEK1-206ENST00000510533 IGHV3-43A0A0B4J1X8 118 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 BMPR1BO00238 502 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 IGHV3-43DP0DP04 118 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 HLA-GP17693 338 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 OR3A1P47881 315 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 FAM109BQ6ICB4 259 aaPredicted RBP9.38□□□□□ -0.91
NEK1-206ENST00000510533 STPG2Q8N412 459 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 SH2D2AQ9NP31 389 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 FRRS1LQ9P0K9 344 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 ELOA3CA0A087WX78 387 aaPredicted RBP9.38□□□□□ -0.91
NEK1-206ENST00000510533 A0A1W2PN81 502 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 FFAR1O14842 300 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 CST2P09228 141 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 CXCL3P19876 107 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 SRD5A2P31213 254 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 BSXQ3C1V8 233 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 MESTQ5EB52 335 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 OR5D13Q8NGL4 314 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 WDR13Q9H1Z4 485 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 IL36GQ9NZH8 169 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 FZR1Q9UM11 496 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 HPXP02790 462 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 ANKRD34CP0C6C1 535 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 ERVS71-1P61550 626 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 TMEM97Q5BJF2 176 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 TBC1D26Q86UD7 250 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 CARFQ8N187 725 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 BLNKQ8WV28 456 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 IL22RA2Q969J5 263 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 ATP5SQ99766 215 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 RSRP1Q9BUV0 290 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 GAL3ST2Q9H3Q3 398 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 MANBALQ9NQG1 85 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 STARD10Q9Y365 291 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 LIPGQ9Y5X9 500 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 TRAV34A0A0B4J273 112 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 MEX3AA1L020 520 aaKnown RBP9.38□□□□□ -0.91
NEK1-206ENST00000510533 SP1P08047 785 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 GALNSP34059 522 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 SLC16A13Q7RTY0 426 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 TIPARPQ7Z3E1 657 aaKnown RBP9.38□□□□□ -0.91
NEK1-206ENST00000510533 OR4D10Q8NGI6 311 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 MRGPRDQ8TDS7 321 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 MPC1Q9Y5U8 109 aa9.38□□□□□ -0.91
NEK1-206ENST00000510533 C8orf82Q6P1X6 216 aaPredicted RBP9.37□□□□□ -0.91
NEK1-206ENST00000510533 C16orf47Q6ZP98 133 aaPredicted RBP9.37□□□□□ -0.91
NEK1-206ENST00000510533 NPEPL1Q8NDH3 523 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 OR4D11Q8NGI4 311 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 PLA2G2FQ9BZM2 168 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 SEBOXQ9HB31 216 aaPredicted RBP9.37□□□□□ -0.91
NEK1-206ENST00000510533 GPR27Q9NS67 375 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 FLRT3Q9NZU0 649 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 NTMQ9P121 344 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 PATE4P0C8F1 98 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 CCL2P13500 99 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 BMI1P35226 326 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 SLC25A30Q5SVS4 291 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 C9orf50Q5SZB4 431 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 SPNS3Q6ZMD2 512 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 OR4D9Q8NGE8 314 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 OR2T10Q8NGZ9 312 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 TTC3P53804 2025 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 SH2D7A6NKC9 451 aaPredicted RBP9.37□□□□□ -0.91
NEK1-206ENST00000510533 SYNGR2O43760 224 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 LANCL1O43813 399 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 NEURL1O76050 574 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 CTGFP29279 349 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 ATG4DQ86TL0 474 aaPredicted RBP9.37□□□□□ -0.91
NEK1-206ENST00000510533 SEC11CQ9BY50 192 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 PRR13Q9NZ81 148 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 CLEC1BQ9P126 229 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 TCRBV16S1A1N1A0A5B0 115 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 hADV38S2A0JD32 116 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 TRDCB7Z8K6 153 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 ARG1P05089 322 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 POU2F2P09086 479 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 RPS4Y1P22090 263 aaKnown RBP9.37□□□□□ -0.91
NEK1-206ENST00000510533 EIF3IQ13347 325 aaKnown RBP9.37□□□□□ -0.91
NEK1-206ENST00000510533 SLC25A42Q86VD7 318 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 OR11H7Q8NGC8 314 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 SLC52A3Q9NQ40 469 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 OR1A1Q9P1Q5 309 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 OPN4Q9UHM6 478 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 ZNF107Q9UII5 783 aaPredicted RBP9.37□□□□□ -0.91
NEK1-206ENST00000510533 TRBV5-3A0A0A0MS03 114 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 SOCS1O15524 211 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 GOSR1O95249 250 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 RPS4XP62701 263 aaKnown RBP9.37□□□□□ -0.91
NEK1-206ENST00000510533 LSMEM1Q8N8F7 131 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 OR10AC1Q8NH08 325 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms