RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 RAMP1O60894 148 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 LIMS3P0CW19 117 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 LIMS4P0CW20 117 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 CDKN1AP38936 164 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 OR10A3P58181 314 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 KCNMB1Q16558 191 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 STUMQ69YW2 141 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 SSX9Q7RTT3 188 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 PARP16Q8N5Y8 322 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 GCSAMQ8N6F7 178 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 RANBP3Q9H6Z4 567 aaPredicted RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 TMEM106BQ9NUM4 274 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 FBXO7Q9Y3I1 522 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 ALG5Q9Y673 324 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 MGST3O14880 152 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 XRCC3O43542 346 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 HOXB5P09067 269 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 HIST1H1DP16402 221 aaKnown RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 GIFP27352 417 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 OR3A1P47881 315 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 GAS1P54826 345 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 HBG1P69891 147 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 HBG2P69892 147 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 DMKNQ6E0U4 476 aaPredicted RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 TMEM123Q8N131 208 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 GPX8Q8TED1 209 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 ZNF431Q8TF32 576 aaPredicted RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 APH1BQ8WW43 257 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 SNX22Q96L94 193 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 RAB18Q9NP72 206 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 KIAA1549LQ6ZVL6 1849 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 RALGAPA1Q6GYQ0 2036 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 TRBV23-1A0A0A0MS06 115 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 A0A0G2JMP0 313 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 RRASP10301 218 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 RFX2P48378 723 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 GZMKP49863 264 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 ROM1Q03395 351 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 ZNF770Q6IQ21 691 aaPredicted RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 SUMF2Q8NBJ7 301 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 OR4M2Q8NGB6 313 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 DMRTB1Q96MA1 342 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 FKBP11Q9NYL4 201 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 MBD2Q9UBB5 411 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 PPIAL4CA0A0B4J2A2 164 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 ZNF716A6NP11 495 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 RP2O75695 350 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 ZIC2O95409 532 aaPredicted RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 TTRP02766 147 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 PPIAL4GP0DN37 164 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 GP2P55259 537 aaKnown RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 RPL11P62913 178 aaKnown RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 NKX6-1P78426 367 aaPredicted RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 TMEM267Q0VDI3 215 aaPredicted RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 PDCD1Q15116 288 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 AKIRIN2Q53H80 203 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 OR2B11Q5JQS5 317 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 NUDCD2Q8WVJ2 157 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 ORAI1Q96D31 301 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 POM121Q96HA1 1249 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 SSBP3Q9BWW4 388 aaPredicted RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 RALYQ9UKM9 306 aaKnown RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 CACNA1IQ9P0X4 2223 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 RPS10-NUDT3A0A1W2PQS6 291 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 TRDCB7Z8K6 153 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 GPR31O00270 319 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 CTDSP2O14595 271 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 CD1AP06126 327 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 FAM106CPP0CH98 169 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 ELK1P19419 428 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 ERP29P30040 261 aaKnown RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 PDLIM3Q53GG5 364 aaPredicted RBP4.43□□□□□ -1.7
PHF3-210ENST00000509876 AKR1C8PQ5T2L2 129 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 NCR3LG1Q68D85 454 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 OR10K2Q6IF99 312 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 RFESDQ8TAC1 157 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 DPF1Q92782 380 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 MEGF10Q96KG7 1140 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 TMEM56Q96MV1 263 aa4.43□□□□□ -1.7
PHF3-210ENST00000509876 KNL1Q8NG31 2342 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 IGHV3-43A0A0B4J1X8 118 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 LIPFP07098 398 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 IGHV3-43DP0DP04 118 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 KIR2DL2P43627 348 aaPredicted RBP4.42□□□□□ -1.7
PHF3-210ENST00000509876 SLC35B1P78383 322 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 MRPS11P82912 194 aaKnown RBP4.42□□□□□ -1.7
PHF3-210ENST00000509876 LSM11P83369 360 aaKnown RBP eCLIP4.42□□□□□ -1.7
PHF3-210ENST00000509876 SAXO1Q8IYX7 474 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 ZNF418Q8TF45 676 aaPredicted RBP4.42□□□□□ -1.7
PHF3-210ENST00000509876 ARHGAP5-AS1Q96IT6 56 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 MAP6Q96JE9 813 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 POM121L2Q96KW2 1035 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 WFDC6Q9BQY6 131 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 FAAP24Q9BTP7 215 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 PECRQ9BY49 303 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 PITPNC1Q9UKF7 332 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 KLHDC2Q9Y2U9 406 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 COL4A3Q01955 1670 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 BRWD1Q9NSI6 2320 aa4.42□□□□□ -1.7
PHF3-210ENST00000509876 C17orf100A8MU93 164 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms