RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 GHSRQ92847 366 aa13.21□□□□□ -0.29
PDLIM5-212ENST00000509333 RFT1Q96AA3 541 aa13.21□□□□□ -0.29
PDLIM5-212ENST00000509333 SNX22Q96L94 193 aa13.21□□□□□ -0.29
PDLIM5-212ENST00000509333 METTL8Q9H825 291 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-212ENST00000509333 ZMAT3Q9HA38 289 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-212ENST00000509333 HMG20AQ9NP66 347 aa13.21□□□□□ -0.29
PDLIM5-212ENST00000509333 FKBP14Q9NWM8 211 aa13.21□□□□□ -0.29
PDLIM5-212ENST00000509333 IL36RNQ9UBH0 155 aa13.21□□□□□ -0.29
PDLIM5-212ENST00000509333 ZNF281Q9Y2X9 895 aa13.21□□□□□ -0.29
PDLIM5-212ENST00000509333 A0A0U1RQK1 487 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 SULT1B1O43704 296 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 KDM4BO94953 1096 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 MELTFP08582 738 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 OCM2P0CE71 109 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 OCMP0CE72 109 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 SOX2P48431 317 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 UBE2E1P51965 193 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 ERVFRD-1P60508 538 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 ZP1P60852 638 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 GUCA2AQ02747 115 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 BLMHQ13867 455 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 C6orf141Q5SZD1 244 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 C12orf54Q6X4T0 127 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 ZSCAN4Q8NAM6 433 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 EMG1Q92979 244 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 SLC25A28Q96A46 364 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 NEK6Q9HC98 313 aa13.2□□□□□ -0.3
PDLIM5-212ENST00000509333 ERICH4A6NGS2 130 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 HAND1O96004 215 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 ALDOBP05062 364 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 LMO1P25800 156 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 DLX6P56179 175 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 RPS11P62280 158 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 ACTG1P63261 375 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 KLRD1Q13241 179 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 MED21Q13503 144 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 PNKDQ8N490 385 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 NANOGP1Q8N7R0 232 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 OR51A2Q8NGJ7 313 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 TSEN15Q8WW01 171 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 SMIM19Q96E16 107 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 AJUBAQ96IF1 538 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 VCXQ9H320 206 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 RHOFQ9HBH0 211 aa13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 SF3B6Q9Y3B4 125 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-212ENST00000509333 TRBV5-5A0A0J9YX44 114 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 A0A1W2PRD5 423 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 A0A1W2PRF3 423 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 A0A1W2PRM7 423 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 C17orf98A8MV24 154 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 NPFFO15130 113 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 PSPNO60542 156 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 GPX5O75715 221 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 TMEM225BP0DP42 221 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 CCL3L1P16619 93 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 PRKACAP17612 351 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 RAB3AP20336 220 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 EEF1B2P24534 225 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 IER3P46695 156 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 DOC2BQ14184 412 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 ZNF273Q14593 569 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 RNLSQ5VYX0 342 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 NCR3LG1Q68D85 454 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 ASCL4Q6XD76 172 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 OR8H2Q8N162 312 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 STX19Q8N4C7 294 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 TMEM86BQ8N661 226 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 ASCC1Q8N9N2 400 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 OR4S1Q8NGB4 309 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 OR5D18Q8NGL1 313 aa13.18□□□□□ -0.3
PDLIM5-212ENST00000509333 ANK2Q01484 3957 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 A0A1W2PPH5 198 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 SH2D1BO14796 132 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 HCKP08631 526 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 CFPP27918 469 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 AQP4P55087 323 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 ACSM1Q08AH1 577 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 AWAT1Q58HT5 328 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 SPIN3Q5JUX0 258 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 Q6P435 159 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 AHSA2Q719I0 299 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 GDPD3Q7L5L3 318 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 LDLRAD3Q86YD5 345 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 ZFP41Q8N8Y5 198 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 Q8NFD4 153 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 PXT1Q8NFP0 134 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 TAF15Q92804 592 aaKnown RBP eCLIP13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 TMEM106AQ96A25 262 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 PGLYRP3Q96LB9 341 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 HEXA-AS1Q9H8Q6 139 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 TAS2R4Q9NYW5 299 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 GLS2Q9UI32 602 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 GSTK1Q9Y2Q3 226 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 FAM96BQ9Y3D0 163 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 POMT1Q9Y6A1 747 aa13.17□□□□□ -0.3
PDLIM5-212ENST00000509333 A0A0G2JK05 382 aa13.16□□□□□ -0.3
PDLIM5-212ENST00000509333 PTGES3LE9PB15 166 aa13.16□□□□□ -0.3
PDLIM5-212ENST00000509333 CD1AP06126 327 aa13.16□□□□□ -0.3
PDLIM5-212ENST00000509333 CD2P06729 351 aa13.16□□□□□ -0.3
PDLIM5-212ENST00000509333 ZNF728P0DKX0 622 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms