RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 GPR107Q5VW38 600 aa8.56□□□□□ -1.04
HTT-204ENST00000508321 SFRP4Q6FHJ7 346 aaPredicted RBP8.56□□□□□ -1.04
HTT-204ENST00000508321 SFXN4Q6P4A7 337 aa8.56□□□□□ -1.04
HTT-204ENST00000508321 ZNF788Q6ZQV5 615 aa8.56□□□□□ -1.04
HTT-204ENST00000508321 OSR2Q8N2R0 312 aa8.56□□□□□ -1.04
HTT-204ENST00000508321 KCNG3Q8TAE7 436 aa8.56□□□□□ -1.04
HTT-204ENST00000508321 PPP1R35Q8TAP8 253 aa8.56□□□□□ -1.04
HTT-204ENST00000508321 C1orf147Q96MC9 270 aaPredicted RBP8.56□□□□□ -1.04
HTT-204ENST00000508321 ZNF488Q96MN9 340 aa8.56□□□□□ -1.04
HTT-204ENST00000508321 GFI1Q99684 422 aa8.56□□□□□ -1.04
HTT-204ENST00000508321 TMEM59Q9BXS4 323 aa8.56□□□□□ -1.04
HTT-204ENST00000508321 SPACA1Q9HBV2 294 aa8.56□□□□□ -1.04
HTT-204ENST00000508321 ING4Q9UNL4 249 aa8.56□□□□□ -1.04
HTT-204ENST00000508321 ABCA2Q9BZC7 2435 aa8.56□□□□□ -1.04
HTT-204ENST00000508321 YLPM1P49750 1951 aaKnown RBP8.55□□□□□ -1.04
HTT-204ENST00000508321 SETD2Q9BYW2 2564 aaPredicted RBP8.55□□□□□ -1.04
HTT-204ENST00000508321 IGKV1D-17A0A075B6S4 117 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 IGHV3OR15-7A0A075B7D8 119 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 PPIAL4CA0A0B4J2A2 164 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 A0A0G2JK05 382 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 SMIM31A0A1B0GVY4 71 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 RFPL4AA6NLU0 287 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 B4DSR2 109 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 RFPL4AL1F8VTS6 287 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 SH2D1BO14796 132 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 TNFRSF13BO14836 293 aaPredicted RBP8.55□□□□□ -1.04
HTT-204ENST00000508321 ADAM20O43506 726 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 ZNF205O95201 554 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 HTR3BO95264 441 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 ECDO95905 644 aaPredicted RBP8.55□□□□□ -1.04
HTT-204ENST00000508321 HAND1O96004 215 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 GYPAP02724 150 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 WNT2P09544 360 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 CALCBP10092 127 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 MGMTP16455 207 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 KCNJ3P48549 501 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 CAV3P56539 151 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 GMFBP60983 142 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 LMO4P61968 165 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 DYNC1I2Q13409 638 aaKnown RBP8.55□□□□□ -1.04
HTT-204ENST00000508321 BLMHQ13867 455 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 TMEM249Q2WGJ8 235 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 RNF144BQ7Z419 303 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 CLVS1Q8IUQ0 354 aaPredicted RBP8.55□□□□□ -1.04
HTT-204ENST00000508321 DEFB108BQ8NET1 73 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 PTX4Q96A99 478 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 FAM3DQ96BQ1 224 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 KCTD12Q96CX2 325 aaKnown RBP8.55□□□□□ -1.04
HTT-204ENST00000508321 C18orf12Q96KH6 178 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 DMRTB1Q96MA1 342 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 GAFA1Q96PS6 74 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 SSBP3Q9BWW4 388 aaPredicted RBP8.55□□□□□ -1.04
HTT-204ENST00000508321 NARFLQ9H6Q4 476 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 LIN7BQ9HAP6 207 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 CLN8Q9UBY8 286 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 OR5V1Q9UGF6 321 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 POLR3KQ9Y2Y1 108 aaPredicted RBP8.55□□□□□ -1.04
HTT-204ENST00000508321 ETV7Q9Y603 341 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 MED13LQ71F56 2210 aa8.55□□□□□ -1.04
HTT-204ENST00000508321 AKAP9Q99996 3911 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 TRBV23-1A0A0A0MS06 115 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 TMEM14DPA8MWL7 114 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 F8VVB4 439 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 F8VWA3 439 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 NDUFB3O43676 98 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 CRTAPO75718 401 aaPredicted RBP8.54□□□□□ -1.04
HTT-204ENST00000508321 SCGNO76038 276 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 CSN2P05814 226 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 VSIG8P0DPA2 414 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 RAB6AP20340 208 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 GATA3P23771 443 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 LMO1P25800 156 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 PRDX2P32119 198 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 SERPINB10P48595 397 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 OR10A3P58181 314 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 VBP1P61758 197 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 NCS1P62166 190 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 GNB2P62879 340 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 PAX5Q02548 391 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 CD276Q5ZPR3 534 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 C1QL2Q7Z5L3 287 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 NR2C2APQ86WQ0 139 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 LINC01356Q8N9X3 169 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 C19orf18Q8NEA5 215 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 OR5D13Q8NGL4 314 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 AP3S1Q92572 193 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 SLC25A28Q96A46 364 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 SLC25A46Q96AG3 418 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 ISOC1Q96CN7 298 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 Q96M66 194 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 URM1Q9BTM9 101 aaKnown RBP8.54□□□□□ -1.04
HTT-204ENST00000508321 TM2D1Q9BX74 207 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 NDUFA13Q9P0J0 144 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 ABRACLQ9P1F3 81 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 CTSZQ9UBR2 303 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 SLC25A10Q9UBX3 287 aaPredicted RBP8.54□□□□□ -1.04
HTT-204ENST00000508321 LPAR3Q9UBY5 353 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 OR14J1Q9UGF5 321 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 ST3GAL6Q9Y274 331 aa8.54□□□□□ -1.04
HTT-204ENST00000508321 HIVEP1P15822 2718 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms