RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 SNAI2O43623 268 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 NPIPB7O75200 414 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 TRAPPC6AO75865 159 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 KLF8O95600 359 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 CSRP1P21291 193 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 OTX2P32243 289 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 PRSS3P35030 304 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 HIST1H1AQ02539 215 aaPredicted RBP9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 SLC25A52Q3SY17 297 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 ZNF260Q3ZCT1 412 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 DPPA3Q6W0C5 159 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 C12orf54Q6X4T0 127 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 SYS1Q8N2H4 156 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 SIRT6Q8N6T7 355 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 CXorf40BQ96DE9 158 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 C2orf50Q96LR7 162 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 TRIB3Q96RU7 358 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 GPR174Q9BXC1 333 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 QTRT1Q9BXR0 403 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 NEUROD4Q9HD90 331 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 HINT3Q9NQE9 182 aaKnown RBP9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 WDR45Q9Y484 360 aa9.46□□□□□ -0.9
PDLIM5-210ENST00000508216 A0A087WV62 115 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 TRAV1-1A0A0B4J248 108 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 CEACAM18A8MTB9 384 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 EEF1E1-BLOC1S5C9J1V9 151 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 HRASP01112 189 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 APOBEC1P41238 236 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 RPS11P62280 158 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 LCN6P62502 163 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 SNRPNP63162 240 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 PMCHL1Q16048 86 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 MPV17LQ2QL34 196 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 Q6ZSR6 202 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 ZNF440Q8IYI8 595 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 ARHGEF39Q8N4T4 335 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 CYB561D1Q8N8Q1 229 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 POC1AQ8NBT0 407 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 P2RX4Q99571 388 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 DERL1Q9BUN8 251 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 SYNPO2LQ9H987 977 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 CLEC1BQ9P126 229 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 DAPP1Q9UN19 280 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 LAMP3Q9UQV4 416 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 UFC1Q9Y3C8 167 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 ATP23Q9Y6H3 246 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 TRAV34A0A0B4J273 112 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 ODAMA1E959 279 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 FAM227AF5H4B4 570 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 HBE1P02100 147 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 KLK2P20151 261 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 SOAT1P35610 550 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 STC1P52823 247 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 RPL15P61313 204 aaKnown RBP9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 CDK5R1Q15078 307 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 TCEAL5Q5H9L2 206 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 ABHD17BQ5VST6 288 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 FAM90A2PQ658T7 463 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 TRIM40Q6P9F5 258 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 OLIG3Q7RTU3 272 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 IL22RA1Q8N6P7 574 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 ZBTB34Q8NCN2 500 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 MORN4Q8NDC4 146 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 ZNF563Q8TA94 476 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 IL22RA2Q969J5 263 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 FGGYQ96C11 551 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 NPY6RQ99463 290 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 CST11Q9H112 138 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 THAP10Q9P2Z0 257 aaPredicted RBP9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 VSIG4Q9Y279 399 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 B3GALT5Q9Y2C3 310 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 MSRB2Q9Y3D2 182 aa9.45□□□□□ -0.9
PDLIM5-210ENST00000508216 PSMB11A5LHX3 300 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 OR2T8A6NH00 312 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 CNIH1O95406 144 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 HLA-DRB1P01911 266 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 LAMP2P13473 410 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 MMP9P14780 707 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 AQP1P29972 269 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 RPL12P30050 165 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 TM4SF1P30408 202 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 PPP1CCP36873 323 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 MTCP1P56278 107 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 TAS2R50P59544 299 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 RPS15P62841 145 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 PDLIM3Q53GG5 364 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 FAM78BQ5VT40 261 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 OR4D11Q8NGI4 311 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 OR5AR1Q8NGP9 310 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 NFKBIDQ8NI38 313 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 ANAPC16Q96DE5 110 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 DAZAP1Q96EP5 407 aaKnown RBP9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 TSSK3Q96PN8 268 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 RARRES2Q99969 163 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 PARLQ9H300 379 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 ANK1P16157 1881 aa9.44□□□□□ -0.9
PDLIM5-210ENST00000508216 TNS1Q9HBL0 1735 aaKnown RBP9.43□□□□□ -0.9
PDLIM5-210ENST00000508216 UBR3Q6ZT12 1888 aa9.43□□□□□ -0.9
PDLIM5-210ENST00000508216 SAA2-SAA4A0A096LPE2 208 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms