RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 GLT8D1Q68CQ7 371 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 HIST2H2BCQ6DN03 193 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 SORCS2Q96PQ0 1159 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 RTL8AQ9BWD3 113 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 GON7Q9BXV9 100 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 TINAGL1Q9GZM7 467 aaPredicted RBP9.37□□□□□ -0.91
PROM1-207ENST00000508167 ARID1AO14497 2285 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 B9A039 149 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 PRF1P14222 555 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 PRKACBP22694 351 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 ATP1B3P54709 279 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 TNFAIP6P98066 277 aaPredicted RBP9.37□□□□□ -0.91
PROM1-207ENST00000508167 SRSF4Q08170 494 aaKnown RBP9.37□□□□□ -0.91
PROM1-207ENST00000508167 DCAF12L2Q5VW00 463 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 OR8G5Q8NG78 346 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 OR51S1Q8NGJ8 323 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 MARVELD3Q96A59 401 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 CPNE2Q96FN4 548 aaPredicted RBP9.37□□□□□ -0.91
PROM1-207ENST00000508167 GAL3ST1Q99999 423 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 ZNF442Q9H7R0 627 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 TMEM138Q9NPI0 162 aa9.37□□□□□ -0.91
PROM1-207ENST00000508167 ZNF732B4DXR9 585 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 CDC14BO60729 498 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 IRF2P14316 349 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 ATG5Q9H1Y0 275 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 ZMAT3Q9HA38 289 aaKnown RBP9.36□□□□□ -0.91
PROM1-207ENST00000508167 RPS10-NUDT3A0A1W2PQS6 291 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 MEGF11A6BM72 1044 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 SNRPGP15A8MWD9 76 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 HS3ST1O14792 307 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 CSF1P09603 554 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 NKX6-1P78426 367 aaPredicted RBP9.36□□□□□ -0.91
PROM1-207ENST00000508167 GVQW1Q8N7I0 195 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 SLC6A7Q99884 636 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.36□□□□□ -0.91
PROM1-207ENST00000508167 ING3Q9NXR8 418 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 TREM2Q9NZC2 230 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 ING4Q9UNL4 249 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 MPC1Q9Y5U8 109 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 TMEM235A6NFC5 223 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 F5H5P2 479 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 SIAH2O43255 324 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 PRAF2O60831 178 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 DHFRP00374 187 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 CXCL2P19875 107 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 ZBTB37Q5TC79 503 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 BATF2Q8N1L9 274 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 MUC20Q8N307 709 aaPredicted RBP9.36□□□□□ -0.91
PROM1-207ENST00000508167 FGF23Q9GZV9 251 aaPredicted RBP9.36□□□□□ -0.91
PROM1-207ENST00000508167 MED28Q9H204 178 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 ZNF581Q9P0T4 197 aa9.36□□□□□ -0.91
PROM1-207ENST00000508167 MFNGO00587 321 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 INPP1P49441 399 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 RBP2P50120 134 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 TMEM42Q69YG0 159 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 OR4S1Q8NGB4 309 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 PHF21AQ96BD5 680 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 RAB1BQ9H0U4 201 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 ALX4Q9H161 411 aaPredicted RBP9.35□□□□□ -0.91
PROM1-207ENST00000508167 SCPEP1Q9HB40 452 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 EDARQ9UNE0 448 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 CEACAM18A8MTB9 384 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 CSTBP04080 98 aaKnown RBP9.35□□□□□ -0.91
PROM1-207ENST00000508167 ZNF93P35789 620 aaPredicted RBP9.35□□□□□ -0.91
PROM1-207ENST00000508167 HAAOP46952 286 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 HAGHLQ6PII5 290 aaPredicted RBP9.35□□□□□ -0.91
PROM1-207ENST00000508167 ZNF782Q6ZMW2 699 aaPredicted RBP9.35□□□□□ -0.91
PROM1-207ENST00000508167 C15orf40Q8WUR7 153 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 TNFAIP8L1Q8WVP5 186 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 HYLS1Q96M11 299 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 VSIG4Q9Y279 399 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 TRAV14DV4A0A0A6YYC5 116 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 LILRA1O75019 489 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 SNU13P55769 128 aaKnown RBP9.35□□□□□ -0.91
PROM1-207ENST00000508167 RBMS2Q15434 407 aaKnown RBP9.35□□□□□ -0.91
PROM1-207ENST00000508167 ATPAF1Q5TC12 328 aaPredicted RBP9.35□□□□□ -0.91
PROM1-207ENST00000508167 MBNL2Q5VZF2 373 aaKnown RBP9.35□□□□□ -0.91
PROM1-207ENST00000508167 STEAP1BQ6NZ63 245 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 SPERTQ8NA61 448 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 ACBD4Q8NC06 268 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 CHST5Q9GZS9 411 aa9.35□□□□□ -0.91
PROM1-207ENST00000508167 IGHV3-13P01766 116 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 ANXA3P12429 323 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 PRSS3P35030 304 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 CDKN1AP38936 164 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 GNG3P63215 75 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 OR8B8Q15620 311 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 METTL11BQ5VVY1 283 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 SPSB4Q96A44 273 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 FOXRED1Q96CU9 486 aaPredicted RBP9.34□□□□□ -0.91
PROM1-207ENST00000508167 CCL19Q99731 98 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 SAP30LQ9HAJ7 183 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 RAB22AQ9UL26 194 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 IQCF6A8MYZ5 107 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 CFDP00746 253 aaPredicted RBP9.34□□□□□ -0.91
PROM1-207ENST00000508167 ZNF250P15622 560 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 TNFRSF1AP19438 455 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 AP3S2P59780 193 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 AWAT2Q6E213 333 aa9.34□□□□□ -0.91
PROM1-207ENST00000508167 ANGPTL5Q86XS5 388 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms