RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 PLA1AQ53H76 456 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 FN3KRPQ9HA64 309 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 CLDN16Q9Y5I7 305 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 TMEM30CPA0ZSE6 113 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 PRR32B1ATL7 298 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 ICMTO60725 284 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 CLPSP04118 112 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 IL5P05113 134 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 OR3A1P47881 315 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 Q8IYB0 196 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 TIMD4Q96H15 378 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 SCNM1Q9BWG6 230 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 GSX2Q9BZM3 304 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 PLEKHA3Q9HB20 300 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 PINLYPA6NC86 204 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 FADS6Q8N9I5 356 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 ZNF629Q9UEG4 869 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-207ENST00000504761 ANXA10Q9UJ72 324 aa12.27□□□□□ -0.45
TCOF1-207ENST00000504761 WNK2Q9Y3S1 2297 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 CDX4O14627 284 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-207ENST00000504761 LGALS4P56470 323 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 KLF9Q13886 244 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-207ENST00000504761 RIPPLY2Q5TAB7 128 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 KCNJ16Q9NPI9 418 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 FBXO7Q9Y3I1 522 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 USF3Q68DE3 2245 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 A0A0U1RQV5 110 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 TGM6O95932 706 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 TNFSF10P50591 281 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 PPT1P50897 306 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 RPS16P62249 146 aaKnown RBP12.26□□□□□ -0.45
TCOF1-207ENST00000504761 INO80CQ6PI98 192 aaPredicted RBP12.26□□□□□ -0.45
TCOF1-207ENST00000504761 ACOT7LQ6ZUV0 252 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 OR14K1Q8NGZ2 314 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 KCNK7Q9Y2U2 307 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 LIPGQ9Y5X9 500 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 A0A1W2PPV4 95 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 PRR33A8MZF0 331 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 FPR2P25090 351 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 KRBOX4Q5JUW0 171 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 MOGAT3Q86VF5 341 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 BMPERQ8N8U9 685 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 OR10X1Q8NGY0 326 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 C2orf50Q96LR7 162 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 WNT5BQ9H1J7 359 aa12.26□□□□□ -0.45
TCOF1-207ENST00000504761 GSTZ1O43708 216 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-207ENST00000504761 IFNA1P01562 189 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 CD1AP06126 327 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 RBMXL1Q96E39 390 aaKnown RBP12.25□□□□□ -0.45
TCOF1-207ENST00000504761 FAM212BQ9NTI7 297 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-207ENST00000504761 PIEZO1Q92508 2521 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 LRP5LA4QPB2 252 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 C16orf97H3BN30 126 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 GPR31O00270 319 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 CCL21O00585 134 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 CTDSPLO15194 276 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 OR2F2O95006 317 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 RPL12P30050 165 aaKnown RBP12.25□□□□□ -0.45
TCOF1-207ENST00000504761 ASCL1P50553 236 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 SRSF6Q13247 344 aaKnown RBP12.25□□□□□ -0.45
TCOF1-207ENST00000504761 COL19A1Q14993 1142 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 ST6GAL2Q96JF0 529 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 TRBV5-7A0A0A0MS05 114 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 C9orf170A2RU37 121 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 PCP4L1A6NKN8 68 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 AADACP22760 399 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 HBG1P69891 147 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 HBG2P69892 147 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 BAXQ07812 192 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 ZNF674Q2M3X9 581 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 UNQ9370/PRO34162Q6UXP9 181 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 TPRX1Q8N7U7 411 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 ZNF680Q8NEM1 530 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 C22orf15Q8WYQ4 148 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 MRPS24Q96EL2 167 aaKnown RBP12.25□□□□□ -0.45
TCOF1-207ENST00000504761 ZNF649Q9BS31 505 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 ZNF552Q9H707 407 aaPredicted RBP12.25□□□□□ -0.45
TCOF1-207ENST00000504761 OSGIN2Q9Y236 505 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 FAM208BQ5VWN6 2430 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 SPG11Q96JI7 2443 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 hCG_1809904A0A1W2PP81 198 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 A0A1W2PPE2 198 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 A0A1W2PR64 198 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 A0A1W2PRV1 198 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 CST7O76096 145 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 HEXAP06865 529 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 GNG10P50151 68 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 UBE2V2Q15819 145 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 PHYHD1Q5SRE7 291 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 TCTE3Q8IZS6 198 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 TAF9BQ9HBM6 251 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 PSG11Q9UQ72 335 aa12.25□□□□□ -0.45
TCOF1-207ENST00000504761 RPP30P78346 268 aaKnown RBP12.24□□□□□ -0.45
TCOF1-207ENST00000504761 SNTB1Q13884 538 aaKnown RBP12.24□□□□□ -0.45
TCOF1-207ENST00000504761 ZDHHC22Q8N966 263 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 C10orf35Q96D05 121 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 LPAR5Q9H1C0 372 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 AHRRA9YTQ3 701 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 NEURL1O76050 574 aa12.24□□□□□ -0.45
TCOF1-207ENST00000504761 FAM87AP0C7U9 286 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms