RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 GCSAMQ8N6F7 178 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 OR56B1Q8NGI3 324 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 CHPT1Q8WUD6 406 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 NUDCD2Q8WVJ2 157 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 DHRS9Q9BPW9 319 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 SULT4A1Q9BR01 284 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 URM1Q9BTM9 101 aaKnown RBP8.76□□□□□ -1.01
TPM3-217ENST00000504663 WDR13Q9H1Z4 485 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 IFT22Q9H7X7 185 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 ELL3Q9HB65 397 aaPredicted RBP8.76□□□□□ -1.01
TPM3-217ENST00000504663 DIABLOQ9NR28 239 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 DCAF16Q9NXF7 216 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 KLK11Q9UBX7 282 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 MTFP1Q9UDX5 166 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 POU2F3Q9UKI9 436 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 HSF4Q9ULV5 492 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 MRPS7Q9Y2R9 242 aaKnown RBP8.76□□□□□ -1.01
TPM3-217ENST00000504663 TENM4Q6N022 2769 aa8.76□□□□□ -1.01
TPM3-217ENST00000504663 DCHS2Q6V1P9 2916 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 LRRK2Q5S007 2527 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 TRAV24A0A0B4J272 114 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 A0A1B0GVG6 124 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 ANKRD20A5PA0PJZ0 165 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 METTL21EPA6NDL7 271 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 MEIS3P1A6NDR6 274 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 SRRM5B3KS81 715 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 TRAPPC2LH3BP13 241 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 SULT1C2O00338 296 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 CA11O75493 328 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 CD8AP01732 235 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 PF4P02776 101 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 GRPP07492 148 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 DANCRP0C864 163 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 GABRR1P24046 479 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 RANBP1P43487 201 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 ZNF146Q15072 292 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 NKPD1Q17RQ9 610 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 HACD4Q5VWC8 232 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 GDPD3Q7L5L3 318 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 FAM58AQ8N1B3 248 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 ZCCHC24Q8N2G6 241 aaKnown RBP8.75□□□□□ -1.01
TPM3-217ENST00000504663 OR10Z1Q8NGY1 313 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 SETD6Q8TBK2 473 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 Q8TCH9 128 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 IGFBPL1Q8WX77 278 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 DYRK2Q92630 601 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 EMG1Q92979 244 aaKnown RBP8.75□□□□□ -1.01
TPM3-217ENST00000504663 RAB3CQ96E17 227 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 S100A13Q99584 98 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 HDHD3Q9BSH5 251 aaPredicted RBP8.75□□□□□ -1.01
TPM3-217ENST00000504663 SCPEP1Q9HB40 452 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 RHOFQ9HBH0 211 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 GCM1Q9NP62 436 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 UFSP2Q9NUQ7 469 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 CISD1Q9NZ45 108 aaKnown RBP8.75□□□□□ -1.01
TPM3-217ENST00000504663 IL19Q9UHD0 177 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 ST3GAL6Q9Y274 331 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 KLF2Q9Y5W3 355 aaPredicted RBP8.75□□□□□ -1.01
TPM3-217ENST00000504663 COL12A1Q99715 3063 aa8.75□□□□□ -1.01
TPM3-217ENST00000504663 DYSFO75923 2080 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 B9A039 149 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 PDCD6O75340 191 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 CLDN1O95832 211 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 CSTBP04080 98 aaKnown RBP8.74□□□□□ -1.01
TPM3-217ENST00000504663 TFF1P04155 84 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 LPLP06858 475 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 PRKACAP17612 351 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 NAT1P18440 290 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 AMY2BP19961 511 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 BLVRBP30043 206 aaPredicted RBP8.74□□□□□ -1.01
TPM3-217ENST00000504663 PRSS3P35030 304 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 TNFAIP6P98066 277 aaPredicted RBP8.74□□□□□ -1.01
TPM3-217ENST00000504663 PNLIPRP3Q17RR3 467 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 MPV17LQ2QL34 196 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 SFRP4Q6FHJ7 346 aaPredicted RBP8.74□□□□□ -1.01
TPM3-217ENST00000504663 ACP7Q6ZNF0 438 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 Q6ZNX1 250 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 DCDC5Q6ZRR9 648 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 DTX2Q86UW9 622 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 MOGAT3Q86VF5 341 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 CENPSQ8N2Z9 138 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 C15orf40Q8WUR7 153 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 SNAPC3Q92966 411 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 C1orf123Q9NWV4 160 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 AK3Q9UIJ7 227 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 ZNF222Q9UK12 451 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 ZDHHC8Q9ULC8 765 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 PLEKHA6Q9Y2H5 1048 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 POLDIP2Q9Y2S7 368 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 DSCAMO60469 2012 aa8.74□□□□□ -1.01
TPM3-217ENST00000504663 UTP20O75691 2785 aaKnown RBP8.73□□□□□ -1.01
TPM3-217ENST00000504663 IGKV1D-8A0A087WSZ0 117 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 PLSCR5A0PG75 271 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 A6NNC1 897 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 M0R233 179 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 EREGO14944 169 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 PTTG1O95997 202 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 CD74P04233 296 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 SOD3P08294 240 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 PLA2G2AP14555 144 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms