RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 ACSM1Q08AH1 577 aa17.36■□□□□ 0.37
TRAPPC11-203ENST00000504526 XAF1Q6GPH4 301 aa17.36■□□□□ 0.37
TRAPPC11-203ENST00000504526 C16orf87Q6PH81 154 aa17.36■□□□□ 0.37
TRAPPC11-203ENST00000504526 PDZD9Q8IXQ8 264 aa17.36■□□□□ 0.37
TRAPPC11-203ENST00000504526 ZSCAN4Q8NAM6 433 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC11-203ENST00000504526 PPP1R35Q8TAP8 253 aa17.36■□□□□ 0.37
TRAPPC11-203ENST00000504526 SSMEM1Q8WWF3 244 aa17.36■□□□□ 0.37
TRAPPC11-203ENST00000504526 RFT1Q96AA3 541 aa17.36■□□□□ 0.37
TRAPPC11-203ENST00000504526 SMIM19Q96E16 107 aa17.36■□□□□ 0.37
TRAPPC11-203ENST00000504526 RBFOX1Q9NWB1 397 aaKnown RBP17.36■□□□□ 0.37
TRAPPC11-203ENST00000504526 NKX1-2Q9UD57 310 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC11-203ENST00000504526 SF3B6Q9Y3B4 125 aaKnown RBP17.36■□□□□ 0.37
TRAPPC11-203ENST00000504526 PCDHGB5Q9Y5G0 923 aa17.36■□□□□ 0.37
TRAPPC11-203ENST00000504526 A0A0U1RQK1 487 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 NPFFO15130 113 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 KDM4BO94953 1096 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 MELTFP08582 738 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 PRKACAP17612 351 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 KISS1Q15726 138 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 TMEM200BQ69YZ2 307 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 GDPD3Q7L5L3 318 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 LDLRAD3Q86YD5 345 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 OR8H2Q8N162 312 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 STX19Q8N4C7 294 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 PIP4P2Q8N4L2 257 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 OR4M1Q8NGD0 313 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 SPACA5Q96QH8 159 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 HMG20AQ9NP66 347 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 CLEC2DQ9UHP7 191 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 PSORS1C1Q9UIG5 152 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 ZNF281Q9Y2X9 895 aa17.35■□□□□ 0.37
TRAPPC11-203ENST00000504526 ANGPTL7O43827 346 aa17.34■□□□□ 0.37
TRAPPC11-203ENST00000504526 FBP1P09467 338 aa17.34■□□□□ 0.37
TRAPPC11-203ENST00000504526 SOX2P48431 317 aa17.34■□□□□ 0.37
TRAPPC11-203ENST00000504526 TAS2R43P59537 309 aa17.34■□□□□ 0.37
TRAPPC11-203ENST00000504526 KLRD1Q13241 179 aa17.34■□□□□ 0.37
TRAPPC11-203ENST00000504526 LAIR2Q6ISS4 152 aa17.34■□□□□ 0.37
TRAPPC11-203ENST00000504526 ZNF529Q6P280 563 aa17.34■□□□□ 0.37
TRAPPC11-203ENST00000504526 OR5D18Q8NGL1 313 aa17.34■□□□□ 0.37
TRAPPC11-203ENST00000504526 RGP1Q92546 391 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC11-203ENST00000504526 HEXA-AS1Q9H8Q6 139 aa17.34■□□□□ 0.37
TRAPPC11-203ENST00000504526 IGKV1-12A0A0C4DH73 117 aa17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 HAX1O00165 279 aa17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 SH2D1BO14796 132 aa17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 XPNPEP2O43895 674 aa17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 IGKV1D-12P01611 117 aa17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 TMEM225BP0DP42 221 aa17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 BMXP51813 675 aa17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 EDDM3BP56851 147 aa17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 MEF2CQ06413 473 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 DMKNQ6E0U4 476 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 AHSA2Q719I0 299 aa17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 ZNF485Q8NCK3 441 aa17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 BPIFB6Q8NFQ5 453 aa17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 TMEM106AQ96A25 262 aa17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 DPAGT1Q9H3H5 408 aa17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 EXOSC4Q9NPD3 245 aaKnown RBP17.33■□□□□ 0.36
TRAPPC11-203ENST00000504526 TMEM82A0PJX8 343 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 MYL12BO14950 172 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 RBP4P02753 201 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 GABRR1P24046 479 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 ERVFRD-1P60508 538 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 ZP1P60852 638 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 RPL15P61313 204 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 MIDNQ504T8 468 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 AWAT1Q58HT5 328 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 CRIP3Q6Q6R5 217 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 C17orf107Q6ZR85 190 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 C3orf56Q8N813 242 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 PXT1Q8NFP0 134 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 GHSRQ92847 366 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 VCX3BQ9H321 246 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 IL36RNQ9UBH0 155 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 GSTK1Q9Y2Q3 226 aa17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 SIRT4Q9Y6E7 314 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC11-203ENST00000504526 hADV38S2A0JD32 116 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 ERICH4A6NGS2 130 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 MGST3O14880 152 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 PAHP00439 452 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 LALBAP00709 142 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 ALDOBP05062 364 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 CCL3L1P16619 93 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 DUSP1P28562 367 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 SAA4P35542 130 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 DLX1P56177 255 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 PPP3R1P63098 170 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 ZNF273Q14593 569 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 GRK1Q15835 563 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 YIF1BQ5BJH7 314 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 C11orf42Q8N5U0 333 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 GPER1Q99527 375 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 TAS2R4Q9NYW5 299 aa17.31■□□□□ 0.36
TRAPPC11-203ENST00000504526 TRBV5-5A0A0J9YX44 114 aa17.3■□□□□ 0.36
TRAPPC11-203ENST00000504526 A0A1W2PRD5 423 aa17.3■□□□□ 0.36
TRAPPC11-203ENST00000504526 A0A1W2PRF3 423 aa17.3■□□□□ 0.36
TRAPPC11-203ENST00000504526 A0A1W2PRM7 423 aa17.3■□□□□ 0.36
TRAPPC11-203ENST00000504526 MEIOCA2RUB1 952 aa17.3■□□□□ 0.36
TRAPPC11-203ENST00000504526 C17orf98A8MV24 154 aa17.3■□□□□ 0.36
TRAPPC11-203ENST00000504526 CRYBA1P05813 215 aa17.3■□□□□ 0.36
TRAPPC11-203ENST00000504526 ZNF728P0DKX0 622 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms