RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 SNX22Q96L94 193 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 HSPB9Q9BQS6 159 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 OR52D1Q9H346 318 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 PCDHB16Q9NRJ7 776 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 LIN7CQ9NUP9 197 aaKnown RBP9.59□□□□□ -0.87
LSM6-204ENST00000504181 FAM53CQ9NYF3 392 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 STUB1Q9UNE7 303 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 KLK5Q9Y337 293 aaPredicted RBP9.59□□□□□ -0.87
LSM6-204ENST00000504181 FAM183AA6NL82 134 aa9.58□□□□□ -0.88
LSM6-204ENST00000504181 ANGPT2O15123 496 aa9.58□□□□□ -0.88
LSM6-204ENST00000504181 ZP1P60852 638 aa9.58□□□□□ -0.88
LSM6-204ENST00000504181 DIAPH2-AS1Q14236 149 aa9.58□□□□□ -0.88
LSM6-204ENST00000504181 GRK1Q15835 563 aa9.58□□□□□ -0.88
LSM6-204ENST00000504181 HEPN1Q6WQI6 88 aa9.58□□□□□ -0.88
LSM6-204ENST00000504181 GTSCR1Q86UQ5 136 aa9.58□□□□□ -0.88
LSM6-204ENST00000504181 ANKRD42Q8N9B4 389 aa9.58□□□□□ -0.88
LSM6-204ENST00000504181 GAL3ST2Q9H3Q3 398 aa9.58□□□□□ -0.88
LSM6-204ENST00000504181 SSU72Q9NP77 194 aaKnown RBP9.58□□□□□ -0.88
LSM6-204ENST00000504181 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.58□□□□□ -0.88
LSM6-204ENST00000504181 POLDIP2Q9Y2S7 368 aa9.58□□□□□ -0.88
LSM6-204ENST00000504181 UBE2J1Q9Y385 318 aaPredicted RBP9.58□□□□□ -0.88
LSM6-204ENST00000504181 IGHV4OR15-8A0A075B7B6 117 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 A0A087WW49 117 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 J3QL48 77 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 IGHA1P01876 353 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 PEX2P28328 305 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 KDELR2P33947 212 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 MAP2K3P46734 347 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 LINC00322Q6ZN03 302 aaPredicted RBP9.57□□□□□ -0.88
LSM6-204ENST00000504181 PGAM4Q8N0Y7 254 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 FAM86B1Q8N7N1 296 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 Q8N9W7 124 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 OR52N4Q8NGI2 321 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 OR2T4Q8NH00 348 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 EBF4Q9BQW3 602 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 PLEKHA3Q9HB20 300 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 SIGLEC8Q9NYZ4 499 aa9.57□□□□□ -0.88
LSM6-204ENST00000504181 GYPBP06028 91 aa9.56□□□□□ -0.88
LSM6-204ENST00000504181 GABRR1P24046 479 aa9.56□□□□□ -0.88
LSM6-204ENST00000504181 FMO3P31513 532 aa9.56□□□□□ -0.88
LSM6-204ENST00000504181 SMCPP49901 116 aaPredicted RBP9.56□□□□□ -0.88
LSM6-204ENST00000504181 ERVK11-1P61568 191 aa9.56□□□□□ -0.88
LSM6-204ENST00000504181 EWSR1Q01844 656 aaKnown RBP eCLIP9.56□□□□□ -0.88
LSM6-204ENST00000504181 ZNF573Q86YE8 665 aa9.56□□□□□ -0.88
LSM6-204ENST00000504181 OR8B12Q8NGG6 310 aa9.56□□□□□ -0.88
LSM6-204ENST00000504181 RNF133Q8WVZ7 376 aa9.56□□□□□ -0.88
LSM6-204ENST00000504181 AMELYQ99218 206 aa9.56□□□□□ -0.88
LSM6-204ENST00000504181 CHCHD6Q9BRQ6 235 aa9.56□□□□□ -0.88
LSM6-204ENST00000504181 ABHD6Q9BV23 337 aa9.56□□□□□ -0.88
LSM6-204ENST00000504181 ELOVL1Q9BW60 279 aa9.56□□□□□ -0.88
LSM6-204ENST00000504181 ANKRD19PQ9H560 264 aa9.56□□□□□ -0.88
LSM6-204ENST00000504181 CCDC134Q9H6E4 229 aa9.56□□□□□ -0.88
LSM6-204ENST00000504181 CHCHD3Q9NX63 227 aaKnown RBP9.56□□□□□ -0.88
LSM6-204ENST00000504181 AMMECR1Q9Y4X0 333 aaPredicted RBP9.56□□□□□ -0.88
LSM6-204ENST00000504181 TRGV10A0A0A0MS01 117 aa9.55□□□□□ -0.88
LSM6-204ENST00000504181 IGHV3-72A0A0B4J1Y9 119 aa9.55□□□□□ -0.88
LSM6-204ENST00000504181 F8VVB4 439 aa9.55□□□□□ -0.88
LSM6-204ENST00000504181 F8VWA3 439 aa9.55□□□□□ -0.88
LSM6-204ENST00000504181 IGHV3-7P01780 117 aa9.55□□□□□ -0.88
LSM6-204ENST00000504181 H2BFMP0C1H6 154 aa9.55□□□□□ -0.88
LSM6-204ENST00000504181 NFYBP25208 207 aa9.55□□□□□ -0.88
LSM6-204ENST00000504181 KPNB1Q14974 876 aaKnown RBP9.55□□□□□ -0.88
LSM6-204ENST00000504181 TEX30Q5JUR7 227 aa9.55□□□□□ -0.88
LSM6-204ENST00000504181 ERICH5Q6P6B1 374 aa9.55□□□□□ -0.88
LSM6-204ENST00000504181 LINC00336Q6ZUF6 198 aa9.55□□□□□ -0.88
LSM6-204ENST00000504181 EAF1Q96JC9 268 aaPredicted RBP9.55□□□□□ -0.88
LSM6-204ENST00000504181 NIPAL2Q9H841 368 aa9.55□□□□□ -0.88
LSM6-204ENST00000504181 TRBV4-1A0A0J9YWV2 114 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 SHISA3A0PJX4 238 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 RGS16O15492 202 aaPredicted RBP9.54□□□□□ -0.88
LSM6-204ENST00000504181 MPZL2O60487 215 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 INMTO95050 263 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 OR5H8P0DN80 308 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 OPRL1P41146 370 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 IDH3AP50213 366 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 RAB7AP51149 207 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 P2RX3P56373 397 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 ZNF684Q5T5D7 378 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 ASRGL1Q7L266 308 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 OR8H3Q8N146 312 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 OR4D6Q8NGJ1 314 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 OR6K6Q8NGW6 343 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 OR6N2Q8NGY6 317 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 TSPEARQ8WU66 669 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 RASL11BQ9BPW5 248 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 THAP7Q9BT49 309 aaPredicted RBP9.54□□□□□ -0.88
LSM6-204ENST00000504181 TOLLIPQ9H0E2 274 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 TPSG1Q9NRR2 321 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 CD300AQ9UGN4 299 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 SLC7A11Q9UPY5 501 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 WSB1Q9Y6I7 421 aa9.54□□□□□ -0.88
LSM6-204ENST00000504181 G3V318 75 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 MGST3O14880 152 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 IDH3BO43837 385 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 CNIH1O95406 144 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 ZNF682O95780 498 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 HAND1O96004 215 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 NRASP01111 189 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 IGF1P05019 195 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 H1F0P07305 194 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms