RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 V9GY05 133 aa8.37□□□□□ -1.07
NUP54-203ENST00000504173 RYR3Q15413 4870 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 SMIM30A4D0T7 59 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 RFPL4AA6NLU0 287 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 OR2AT4A6NND4 320 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 A8MV72 311 aaPredicted RBP8.36□□□□□ -1.07
NUP54-203ENST00000504173 RFPL4AL1F8VTS6 287 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 ADAM20O43506 726 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 ZNF780AO75290 641 aaPredicted RBP8.36□□□□□ -1.07
NUP54-203ENST00000504173 KNG1P01042 644 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 IGHV2-5P01817 119 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 CSTBP04080 98 aaKnown RBP8.36□□□□□ -1.07
NUP54-203ENST00000504173 SFTPBP07988 381 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 PSG2P11465 335 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 SERPINA2P20848 420 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 HTR2CP28335 458 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 IL2RGP31785 369 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 RANBP1P43487 201 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 FGF12P61328 243 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 MXD1Q05195 221 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 GPR176Q14439 515 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 RAB11BQ15907 218 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 SLC22A6Q4U2R8 563 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 C1orf100Q5SVJ3 147 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 LYPD2Q6UXB3 125 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 ASCL4Q6XD76 172 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 NLRC3Q7RTR2 1065 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 SLC36A1Q7Z2H8 476 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 TPRA1Q86W33 373 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 LYPD6Q86Y78 171 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 ANKRD13BQ86YJ7 626 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 OR6M1Q8NGM8 313 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 ANGPTL6Q8NI99 470 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 TBC1D15Q8TC07 691 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 NEIL1Q96FI4 390 aaPredicted RBP8.36□□□□□ -1.07
NUP54-203ENST00000504173 CCL13Q99616 98 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 NAA50Q9GZZ1 169 aaKnown RBP8.36□□□□□ -1.07
NUP54-203ENST00000504173 HMG20AQ9NP66 347 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 YAE1D1Q9NRH1 226 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 PCDHB16Q9NRJ7 776 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 IL36GQ9NZH8 169 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 IL36RNQ9UBH0 155 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 GLS2Q9UI32 602 aa8.36□□□□□ -1.07
NUP54-203ENST00000504173 TRRAPQ9Y4A5 3859 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 IGKV1D-17A0A075B6S4 117 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 F5H0A9 414 aaPredicted RBP8.35□□□□□ -1.07
NUP54-203ENST00000504173 SLC17A2O00624 439 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 TNFRSF13BO14836 293 aaPredicted RBP8.35□□□□□ -1.07
NUP54-203ENST00000504173 SLC22A1O15245 554 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 TMPRSS2O15393 492 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 NOL3O60936 208 aaKnown RBP8.35□□□□□ -1.07
NUP54-203ENST00000504173 GABARAPO95166 117 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 TFF1P04155 84 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 WNT2P09544 360 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 UBBP0CG47 229 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 PRDX2P32119 198 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 SDC2P34741 201 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 TGFBR1P36897 503 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 SERPINB10P48595 397 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 PITPNBP48739 271 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 CEBPDP49716 269 aaPredicted RBP8.35□□□□□ -1.07
NUP54-203ENST00000504173 LMO4P61968 165 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 P2RY14Q15391 338 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 DGUOKQ16854 277 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 TMEM249Q2WGJ8 235 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 ESCO2Q56NI9 601 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 HES5Q5TA89 166 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 ELP2Q6IA86 826 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 SLC16A12Q6ZSM3 486 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 CLVS1Q8IUQ0 354 aaPredicted RBP8.35□□□□□ -1.07
NUP54-203ENST00000504173 CD177Q8N6Q3 437 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 GAFA1Q96PS6 74 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 DNTTIP1Q9H147 329 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 TMEM160Q9NX00 188 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 CTSZQ9UBR2 303 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 GHRLQ9UBU3 117 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 ZNF222Q9UK12 451 aa8.35□□□□□ -1.07
NUP54-203ENST00000504173 CR1P17927 2039 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 WNK1Q9H4A3 2382 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 A0A1B0GW55 424 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 A0A1W2PP11 408 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 IFITM5A6NNB3 132 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 NOTOA8MTQ0 251 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 FAM157AC9JC47 383 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 AIPO00170 330 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 SIGLEC5O15389 551 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 NDUFB3O43676 98 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 CRTAPO75718 401 aaPredicted RBP8.34□□□□□ -1.07
NUP54-203ENST00000504173 BPNT1O95861 308 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 HAND1O96004 215 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 CLEC2LP0C7M8 214 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 DUX4L2P0CJ85 424 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 DUX4L3P0CJ86 424 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 DUX4L4P0CJ87 422 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 DUX4L5P0CJ88 424 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 DUX4L6P0CJ89 424 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 DUX4L7P0CJ90 424 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 CD37P11049 281 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 GTF2F2P13984 249 aa8.34□□□□□ -1.07
NUP54-203ENST00000504173 ARSBP15848 533 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms