RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 IGKV1-9A0A0C4DH69 117 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 TMEM82A0PJX8 343 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 FAM90A8PA6NJQ4 464 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 H3BNX3 289 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 RBP4P02753 201 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 BCL3P20749 454 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 AZGP1P25311 298 aaKnown RBP9.7□□□□□ -0.86
MED28-203ENST00000503945 DUSP1P28562 367 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 NPBWR2P48146 333 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 POU3F4P49335 361 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 DLX6P56179 175 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 ACTA2P62736 377 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 ACTG2P63267 376 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 DYNC1I2Q13409 638 aaKnown RBP9.7□□□□□ -0.86
MED28-203ENST00000503945 ALKBH1Q13686 389 aaKnown RBP9.7□□□□□ -0.86
MED28-203ENST00000503945 GALEQ14376 348 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 EDDM3AQ14507 147 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 ZNF146Q15072 292 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 GRK1Q15835 563 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 SPIN3Q5JUX0 258 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 C11orf88Q6PI97 169 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 LIAT1Q6ZQX7 453 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 Q6ZTK2 550 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 SERPINA12Q8IW75 414 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 OR11H6Q8NGC7 330 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 OR5D14Q8NGL3 314 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 OR4C13Q8NGP0 309 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 OR13C3Q8NGS6 347 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 OR2T6Q8NHC8 308 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 RHOXF1Q8NHV9 184 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 RNF166Q96A37 237 aaPredicted RBP9.7□□□□□ -0.86
MED28-203ENST00000503945 LGALS12Q96DT0 336 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 C4orf36Q96KX1 117 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 ZNF714Q96N38 554 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 OPALINQ96PE5 141 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 MBOAT4Q96T53 435 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 CDCA4Q9BXL8 241 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 ABCB10Q9NRK6 738 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 AASSQ9UDR5 926 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 TBL2Q9Y4P3 447 aaKnown RBP9.7□□□□□ -0.86
MED28-203ENST00000503945 PCDHGB5Q9Y5G0 923 aa9.7□□□□□ -0.86
MED28-203ENST00000503945 TRBV2A0A0J9YWF9 115 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 LOC100130705A0A1B0GUX0 176 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 FUOMA2VDF0 154 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 VGLL3A8MV65 326 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 EBAG9O00559 213 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 MGST3O14880 152 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 IGHV1-8P0DP01 117 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 CALCBP10092 127 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 PRKACAP17612 351 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 PAX6P26367 422 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 RAB13P51153 203 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 BMXP51813 675 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 NANOS3P60323 173 aaKnown RBP9.69□□□□□ -0.86
MED28-203ENST00000503945 MRPL28Q13084 256 aaKnown RBP9.69□□□□□ -0.86
MED28-203ENST00000503945 FAM189A2Q15884 450 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 SSX2Q16385 188 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 KLHL22Q53GT1 634 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 LHFPL4Q7Z7J7 247 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 OR52N4Q8NGI2 321 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 PIFOQ8TCI5 191 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 PELI1Q96FA3 418 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 NPFFR1Q9GZQ6 430 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 CHST6Q9GZX3 395 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 ZCCHC4Q9H5U6 513 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 RHOFQ9HBH0 211 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 AMBNQ9NP70 447 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 RBFOX1Q9NWB1 397 aaKnown RBP9.69□□□□□ -0.86
MED28-203ENST00000503945 GSTK1Q9Y2Q3 226 aa9.69□□□□□ -0.86
MED28-203ENST00000503945 RPL36Q9Y3U8 105 aaKnown RBP9.69□□□□□ -0.86
MED28-203ENST00000503945 MEX3AA1L020 520 aaKnown RBP9.68□□□□□ -0.86
MED28-203ENST00000503945 OR4C45A6NMZ5 311 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 E9PQ18 207 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 PSPNO60542 156 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 BAG2O95816 211 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 IGHA1P01876 353 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 MT-ND2P03891 347 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 TMEM225BP0DP42 221 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 ERP29P30040 261 aaKnown RBP9.68□□□□□ -0.86
MED28-203ENST00000503945 GBX2P52951 348 aaPredicted RBP9.68□□□□□ -0.86
MED28-203ENST00000503945 SNU13P55769 128 aaKnown RBP9.68□□□□□ -0.86
MED28-203ENST00000503945 SCN1BQ07699 218 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 RAB40BQ12829 278 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 HERPUD1Q15011 391 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 TRAPPC6BQ86SZ2 158 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 C1QL4Q86Z23 238 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 SYS1Q8N2H4 156 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 OR4S1Q8NGB4 309 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 RPS4Y2Q8TD47 263 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 FOXRED1Q96CU9 486 aaPredicted RBP9.68□□□□□ -0.86
MED28-203ENST00000503945 NKX3-1Q99801 234 aaPredicted RBP9.68□□□□□ -0.86
MED28-203ENST00000503945 SLC29A1Q99808 456 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 ALG8Q9BVK2 526 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 RANBP3Q9H6Z4 567 aaPredicted RBP9.68□□□□□ -0.86
MED28-203ENST00000503945 S100A14Q9HCY8 104 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 HMG20AQ9NP66 347 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 INPP5EQ9NRR6 644 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 FAM118AQ9NWS6 357 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 PITPNC1Q9UKF7 332 aa9.68□□□□□ -0.86
MED28-203ENST00000503945 MYRFQ9Y2G1 1151 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms