RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SRSF4Q08170 494 aaKnown RBP18.26■□□□□ 0.51
UBE2D3-216ENST00000503742 OR5M8Q8NGP6 311 aa18.26■□□□□ 0.51
UBE2D3-216ENST00000503742 CCDC120Q96HB5 630 aa18.26■□□□□ 0.51
UBE2D3-216ENST00000503742 RTBDNQ9BSG5 229 aaPredicted RBP18.26■□□□□ 0.51
UBE2D3-216ENST00000503742 CUL9Q8IWT3 2517 aa18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 TRAPPC2LH3BP13 241 aa18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 ERVH48-1M5A8F1 160 aa18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 AGFG2O95081 481 aa18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 KRTCAP3Q53RY4 240 aa18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 TMEM128Q5BJH2 165 aa18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 ZNF660Q6AZW8 331 aaPredicted RBP18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 LPCAT3Q6P1A2 487 aa18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 HAGHLQ6PII5 290 aaPredicted RBP18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 SLC25A40Q8TBP6 338 aa18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 ABHD17AQ96GS6 310 aa18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 HEXA-AS1Q9H8Q6 139 aa18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 OBP2BQ9NPH6 170 aa18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 SLC23A1Q9UHI7 598 aa18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 BOD1L1Q8NFC6 3051 aa18.25■□□□□ 0.51
UBE2D3-216ENST00000503742 DUS4LO95620 317 aaKnown RBP18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 PPP3CBP16298 524 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 OPRM1P35372 400 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 ARPC4P59998 168 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 SURF2Q15527 256 aaPredicted RBP18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 EIF2S3LQ2VIR3 472 aaKnown RBP18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 C1orf185Q5T7R7 199 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 ZNF324BQ6AW86 544 aaPredicted RBP18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 C1QTNF6Q9BXI9 259 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 PKIBQ9C010 78 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 OR51I2Q9H344 312 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 RCC2Q9P258 522 aaKnown RBP18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 APC2O95996 2303 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 TPD52L2O43399 206 aaKnown RBP18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 IGLV1-44P01699 117 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 IL24Q13007 206 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 TMEM211Q6ICI0 200 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 Q6ZPA2 131 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 BEND4Q6ZU67 534 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 OR1J1Q8NGS3 322 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 PHB2Q99623 299 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 DECR2Q9NUI1 292 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 ESPL1Q14674 2120 aa18.24■□□□□ 0.51
UBE2D3-216ENST00000503742 BSNQ9UPA5 3926 aa18.23■□□□□ 0.51
UBE2D3-216ENST00000503742 IQCF6A8MYZ5 107 aa18.23■□□□□ 0.51
UBE2D3-216ENST00000503742 VAMP1P23763 118 aa18.23■□□□□ 0.51
UBE2D3-216ENST00000503742 TIMP3P35625 211 aa18.23■□□□□ 0.51
UBE2D3-216ENST00000503742 MPV17LQ2QL34 196 aa18.23■□□□□ 0.51
UBE2D3-216ENST00000503742 FAM76BQ5HYJ3 339 aa18.23■□□□□ 0.51
UBE2D3-216ENST00000503742 RPRMLQ8N4K4 120 aa18.23■□□□□ 0.51
UBE2D3-216ENST00000503742 C12orf4Q9NQ89 552 aa18.23■□□□□ 0.51
UBE2D3-216ENST00000503742 SPTBN2O15020 2390 aa18.23■□□□□ 0.51
UBE2D3-216ENST00000503742 DBX1A6NMT0 343 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 SNAPC5O75971 98 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 ZNF81P51508 661 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 BAMBIQ13145 260 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 FAM180AQ6UWF9 173 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 BHLHA15Q7RTS1 189 aaPredicted RBP18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 ZNF442Q9H7R0 627 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 IL36RNQ9UBH0 155 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 FAM221AA4D161 298 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 HMSDA8MTL9 139 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 CD8AP01732 235 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 CECR9P0C854 216 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 ECI1P42126 302 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 PSG7Q13046 419 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 ALKBH6Q3KRA9 238 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 DHRS11Q6UWP2 260 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 FAM57AQ8TBR7 257 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 MARS2Q96GW9 593 aaKnown RBP18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 ZNF2Q9BSG1 426 aaPredicted RBP18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 RTL8AQ9BWD3 113 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 PLK3Q9H4B4 646 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 NECAP2Q9NVZ3 263 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 TP53TG5Q9Y2B4 290 aa18.22■□□□□ 0.51
UBE2D3-216ENST00000503742 OR5H1A6NKK0 313 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 J3QT63 122 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 GFRA3O60609 400 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 TSC22D2O75157 780 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 OR5H8P0DN80 308 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 SELEP16581 610 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 CXCL2P19875 107 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 PI3P19957 117 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 NFYAP23511 347 aaPredicted RBP18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 SSTR2P30874 369 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 SUPT4H1P63272 117 aaKnown RBP18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 IKZF1Q13422 519 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 LIN54Q6MZP7 749 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 WDR86Q86TI4 376 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 LINC00596Q86U02 117 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 FAM169BQ8N8A8 192 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 KLF14Q8TD94 323 aaPredicted RBP18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 CASTOR1Q8WTX7 329 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 EXTL1Q92935 676 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 MICU1Q9BPX6 476 aa18.21■□□□□ 0.51
UBE2D3-216ENST00000503742 MCRIP1C9JLW8 97 aa18.21■□□□□ 0.5
UBE2D3-216ENST00000503742 K7ENP7 123 aa18.21■□□□□ 0.5
UBE2D3-216ENST00000503742 SFT2D2O95562 160 aa18.21■□□□□ 0.5
UBE2D3-216ENST00000503742 GLRA1P23415 457 aa18.21■□□□□ 0.5
UBE2D3-216ENST00000503742 CALCRP30988 508 aa18.21■□□□□ 0.5
UBE2D3-216ENST00000503742 LIME1Q9H400 295 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms