RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 POLR3KQ9Y2Y1 108 aaPredicted RBP13.68□□□□□ -0.22
SCLT1-205ENST00000503401 A0A0G2JMP0 313 aa13.67□□□□□ -0.22
SCLT1-205ENST00000503401 A0A0X1KG70 313 aa13.67□□□□□ -0.22
SCLT1-205ENST00000503401 NDUFB7P17568 137 aa13.67□□□□□ -0.22
SCLT1-205ENST00000503401 CAPZA1P52907 286 aa13.67□□□□□ -0.22
SCLT1-205ENST00000503401 PAX2Q02962 417 aa13.67□□□□□ -0.22
SCLT1-205ENST00000503401 COL10A1Q03692 680 aa13.67□□□□□ -0.22
SCLT1-205ENST00000503401 PDCD1Q15116 288 aa13.67□□□□□ -0.22
SCLT1-205ENST00000503401 RSU1Q15404 277 aa13.67□□□□□ -0.22
SCLT1-205ENST00000503401 LRRC10Q5BKY1 277 aa13.67□□□□□ -0.22
SCLT1-205ENST00000503401 FAM120AOSQ5T036 256 aa13.67□□□□□ -0.22
SCLT1-205ENST00000503401 LYPD6Q86Y78 171 aa13.67□□□□□ -0.22
SCLT1-205ENST00000503401 OR4M2Q8NGB6 313 aa13.67□□□□□ -0.22
SCLT1-205ENST00000503401 OR4D6Q8NGJ1 314 aa13.67□□□□□ -0.22
SCLT1-205ENST00000503401 IGHV2-70DA0A0C4DH43 119 aa13.66□□□□□ -0.22
SCLT1-205ENST00000503401 A0A1W2PP11 408 aa13.66□□□□□ -0.22
SCLT1-205ENST00000503401 HTR3BO95264 441 aa13.66□□□□□ -0.22
SCLT1-205ENST00000503401 HAND1O96004 215 aa13.66□□□□□ -0.22
SCLT1-205ENST00000503401 AVPP01185 164 aa13.66□□□□□ -0.22
SCLT1-205ENST00000503401 CD200R1LQ6Q8B3 271 aa13.66□□□□□ -0.22
SCLT1-205ENST00000503401 FIP1L1Q6UN15 594 aaKnown RBP13.66□□□□□ -0.22
SCLT1-205ENST00000503401 NKAIN3Q8N8D7 197 aa13.66□□□□□ -0.22
SCLT1-205ENST00000503401 ASCC1Q8N9N2 400 aaKnown RBP13.66□□□□□ -0.22
SCLT1-205ENST00000503401 H1FXQ92522 213 aaKnown RBP13.66□□□□□ -0.22
SCLT1-205ENST00000503401 PHYHIPQ92561 330 aa13.66□□□□□ -0.22
SCLT1-205ENST00000503401 DACT3Q96B18 629 aaPredicted RBP13.66□□□□□ -0.22
SCLT1-205ENST00000503401 TMPRSS13Q9BYE2 586 aa13.66□□□□□ -0.22
SCLT1-205ENST00000503401 MRPS28Q9Y2Q9 187 aaKnown RBP13.66□□□□□ -0.22
SCLT1-205ENST00000503401 INSIG2Q9Y5U4 225 aa13.66□□□□□ -0.22
SCLT1-205ENST00000503401 TRDV1A0A1B0GX56 115 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 MEGF11A6BM72 1044 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 ARL6IP5O75915 188 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 SMIM18P0DKX4 95 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 SERPINA2P20848 420 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 SCN1BQ07699 218 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 ZNF146Q15072 292 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 SLC22A6Q4U2R8 563 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 AWAT2Q6E213 333 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 C22orf42Q6IC83 251 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 GLIPR1L1Q6UWM5 242 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 ASCL4Q6XD76 172 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 C1orf229Q6ZS94 237 aaPredicted RBP13.65□□□□□ -0.22
SCLT1-205ENST00000503401 ZNF561Q8N587 486 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 RAB40AQ8WXH6 277 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 S100A13Q99584 98 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 GFI1Q99684 422 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 NUDT16L1Q9BRJ7 211 aaKnown RBP13.65□□□□□ -0.22
SCLT1-205ENST00000503401 SLITRK2Q9H156 845 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 METTL9Q9H1A3 318 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 OR51E2Q9H255 320 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 C7orf69Q9H7B7 122 aa13.65□□□□□ -0.22
SCLT1-205ENST00000503401 EXOSC4Q9NPD3 245 aaKnown RBP13.65□□□□□ -0.22
SCLT1-205ENST00000503401 AK6Q9Y3D8 172 aaKnown RBP13.65□□□□□ -0.22
SCLT1-205ENST00000503401 PPIAL4CA0A0B4J2A2 164 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 SHISA3A0PJX4 238 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 SIRPB1O00241 398 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 MTNR1BP49286 362 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 FGF12P61328 243 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 PIGYQ3MUY2 71 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 METAP1DQ6UB28 335 aaPredicted RBP13.64□□□□□ -0.23
SCLT1-205ENST00000503401 CHST6Q9GZX3 395 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 VCX3AQ9NNX9 186 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 RPUSD1Q9UJJ7 312 aaKnown RBP13.64□□□□□ -0.23
SCLT1-205ENST00000503401 STUB1Q9UNE7 303 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 DSCAML1Q8TD84 2053 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 TMEM82A0PJX8 343 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 TRIM64CA6NLI5 447 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 ZNF737O75373 536 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 OR2H2O95918 312 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 CHRM2P08172 466 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 CD36P16671 472 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 GADD45AP24522 165 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 SPIN3Q5JUX0 258 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 CD276Q5ZPR3 534 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 GLT8D1Q68CQ7 371 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 ELP2Q6IA86 826 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 BTNL3Q6UXE8 466 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 CDH26Q8IXH8 852 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 UQCC2Q9BRT2 126 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 SHARPINQ9H0F6 387 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 RHOFQ9HBH0 211 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 TXNL4BQ9NX01 149 aaKnown RBP13.64□□□□□ -0.23
SCLT1-205ENST00000503401 ZNF581Q9P0T4 197 aa13.64□□□□□ -0.23
SCLT1-205ENST00000503401 KIR2DS1A0A191URI9 304 aa13.63□□□□□ -0.23
SCLT1-205ENST00000503401 ENSAO43768 121 aaKnown RBP13.63□□□□□ -0.23
SCLT1-205ENST00000503401 PSPNO60542 156 aa13.63□□□□□ -0.23
SCLT1-205ENST00000503401 CSTBP04080 98 aaKnown RBP13.63□□□□□ -0.23
SCLT1-205ENST00000503401 TK1P04183 234 aa13.63□□□□□ -0.23
SCLT1-205ENST00000503401 ZNF44P15621 663 aa13.63□□□□□ -0.23
SCLT1-205ENST00000503401 GATA3P23771 443 aa13.63□□□□□ -0.23
SCLT1-205ENST00000503401 GABRR1P24046 479 aa13.63□□□□□ -0.23
SCLT1-205ENST00000503401 CAV3P56539 151 aa13.63□□□□□ -0.23
SCLT1-205ENST00000503401 KIAA2026Q5HYC2 2103 aa13.63□□□□□ -0.23
SCLT1-205ENST00000503401 Q6P435 159 aa13.63□□□□□ -0.23
SCLT1-205ENST00000503401 C17orf107Q6ZR85 190 aa13.63□□□□□ -0.23
SCLT1-205ENST00000503401 OR4M1Q8NGD0 313 aa13.63□□□□□ -0.23
SCLT1-205ENST00000503401 C1orf147Q96MC9 270 aaPredicted RBP13.63□□□□□ -0.23
SCLT1-205ENST00000503401 CHCHD6Q9BRQ6 235 aa13.63□□□□□ -0.23
SCLT1-205ENST00000503401 DCTN5Q9BTE1 182 aa13.63□□□□□ -0.23
SCLT1-205ENST00000503401 BEX2Q9BXY8 128 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms