RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PAX8Q06710 450 aa20.8■□□□□ 0.92
LSM6-202ENST00000502781 SPIN3Q5JUX0 258 aa20.8■□□□□ 0.92
LSM6-202ENST00000502781 BTN2A1Q7KYR7 527 aa20.8■□□□□ 0.92
LSM6-202ENST00000502781 NKAIN3Q8N8D7 197 aa20.8■□□□□ 0.92
LSM6-202ENST00000502781 ST8SIA4Q92187 359 aa20.8■□□□□ 0.92
LSM6-202ENST00000502781 NUDT16L1Q9BRJ7 211 aaKnown RBP20.8■□□□□ 0.92
LSM6-202ENST00000502781 ZNF696Q9H7X3 374 aa20.8■□□□□ 0.92
LSM6-202ENST00000502781 SLC25A10Q9UBX3 287 aaPredicted RBP20.8■□□□□ 0.92
LSM6-202ENST00000502781 LPAR3Q9UBY5 353 aa20.8■□□□□ 0.92
LSM6-202ENST00000502781 OR14J1Q9UGF5 321 aa20.8■□□□□ 0.92
LSM6-202ENST00000502781 OPN4Q9UHM6 478 aa20.8■□□□□ 0.92
LSM6-202ENST00000502781 MEGF11A6BM72 1044 aa20.79■□□□□ 0.92
LSM6-202ENST00000502781 CCRL2O00421 344 aa20.79■□□□□ 0.92
LSM6-202ENST00000502781 PRKACAP17612 351 aa20.79■□□□□ 0.92
LSM6-202ENST00000502781 ADRA2CP18825 462 aa20.79■□□□□ 0.92
LSM6-202ENST00000502781 PSMB9P28065 219 aa20.79■□□□□ 0.92
LSM6-202ENST00000502781 HSD17B12Q53GQ0 312 aa20.79■□□□□ 0.92
LSM6-202ENST00000502781 SYT6Q5T7P8 510 aaPredicted RBP20.79■□□□□ 0.92
LSM6-202ENST00000502781 LRRTM1Q86UE6 522 aa20.79■□□□□ 0.92
LSM6-202ENST00000502781 SHARPINQ9H0F6 387 aa20.79■□□□□ 0.92
LSM6-202ENST00000502781 TCF7L1Q9HCS4 588 aa20.79■□□□□ 0.92
LSM6-202ENST00000502781 IL36GQ9NZH8 169 aa20.79■□□□□ 0.92
LSM6-202ENST00000502781 NIPBLQ6KC79 2804 aaeCLIP20.78■□□□□ 0.92
LSM6-202ENST00000502781 ENSAO43768 121 aaKnown RBP20.78■□□□□ 0.92
LSM6-202ENST00000502781 ZNF737O75373 536 aa20.78■□□□□ 0.92
LSM6-202ENST00000502781 CHRM2P08172 466 aa20.78■□□□□ 0.92
LSM6-202ENST00000502781 CD37P11049 281 aa20.78■□□□□ 0.92
LSM6-202ENST00000502781 SRMP19623 302 aa20.78■□□□□ 0.92
LSM6-202ENST00000502781 FIP1L1Q6UN15 594 aaKnown RBP20.78■□□□□ 0.92
LSM6-202ENST00000502781 PNLDC1Q8NA58 520 aaKnown RBP20.78■□□□□ 0.92
LSM6-202ENST00000502781 LY6G5BQ8NDX9 201 aa20.78■□□□□ 0.92
LSM6-202ENST00000502781 C8orf46Q8TAG6 207 aa20.78■□□□□ 0.92
LSM6-202ENST00000502781 DMRTB1Q96MA1 342 aa20.78■□□□□ 0.92
LSM6-202ENST00000502781 DCTN5Q9BTE1 182 aa20.78■□□□□ 0.92
LSM6-202ENST00000502781 C7orf69Q9H7B7 122 aa20.78■□□□□ 0.92
LSM6-202ENST00000502781 RPUSD1Q9UJJ7 312 aaKnown RBP20.78■□□□□ 0.92
LSM6-202ENST00000502781 GALP22466 123 aa20.77■□□□□ 0.92
LSM6-202ENST00000502781 MTNR1BP49286 362 aa20.77■□□□□ 0.92
LSM6-202ENST00000502781 BMXP51813 675 aa20.77■□□□□ 0.92
LSM6-202ENST00000502781 FGF12P61328 243 aa20.77■□□□□ 0.92
LSM6-202ENST00000502781 COL10A1Q03692 680 aa20.77■□□□□ 0.92
LSM6-202ENST00000502781 CHRFAM7AQ494W8 412 aa20.77■□□□□ 0.92
LSM6-202ENST00000502781 BTNL3Q6UXE8 466 aa20.77■□□□□ 0.92
LSM6-202ENST00000502781 TMEM185AQ8NFB2 350 aa20.77■□□□□ 0.92
LSM6-202ENST00000502781 TSPAN14Q8NG11 270 aa20.77■□□□□ 0.92
LSM6-202ENST00000502781 BEX2Q9BXY8 128 aa20.77■□□□□ 0.92
LSM6-202ENST00000502781 FAM234AQ9H0X4 552 aa20.77■□□□□ 0.92
LSM6-202ENST00000502781 CNTD2Q9H8S5 307 aa20.77■□□□□ 0.92
LSM6-202ENST00000502781 NF1P21359 2839 aa20.77■□□□□ 0.91
LSM6-202ENST00000502781 A0A087WXM4 84 aa20.76■□□□□ 0.91
LSM6-202ENST00000502781 TRIM64CA6NLI5 447 aa20.76■□□□□ 0.91
LSM6-202ENST00000502781 ARL6IP5O75915 188 aa20.76■□□□□ 0.91
LSM6-202ENST00000502781 CDRT1O95170 752 aa20.76■□□□□ 0.91
LSM6-202ENST00000502781 HAND1O96004 215 aa20.76■□□□□ 0.91
LSM6-202ENST00000502781 LIPFP07098 398 aa20.76■□□□□ 0.91
LSM6-202ENST00000502781 CALCBP10092 127 aa20.76■□□□□ 0.91
LSM6-202ENST00000502781 HOXB4P17483 251 aaPredicted RBP20.76■□□□□ 0.91
LSM6-202ENST00000502781 HNF1AP20823 631 aa20.76■□□□□ 0.91
LSM6-202ENST00000502781 JAGN1Q8N5M9 183 aa20.76■□□□□ 0.91
LSM6-202ENST00000502781 OR51T1Q8NGJ9 327 aa20.76■□□□□ 0.91
LSM6-202ENST00000502781 UQCC2Q9BRT2 126 aa20.76■□□□□ 0.91
LSM6-202ENST00000502781 FAM192AQ9GZU8 254 aa20.76■□□□□ 0.91
LSM6-202ENST00000502781 C2CD3Q4AC94 2353 aa20.76■□□□□ 0.91
LSM6-202ENST00000502781 TRDV1A0A1B0GX56 115 aa20.75■□□□□ 0.91
LSM6-202ENST00000502781 K7N7A8 449 aa20.75■□□□□ 0.91
LSM6-202ENST00000502781 TK1P04183 234 aa20.75■□□□□ 0.91
LSM6-202ENST00000502781 IL17RELQ6ZVW7 336 aa20.75■□□□□ 0.91
LSM6-202ENST00000502781 MUL1Q969V5 352 aa20.75■□□□□ 0.91
LSM6-202ENST00000502781 C1orf147Q96MC9 270 aaPredicted RBP20.75■□□□□ 0.91
LSM6-202ENST00000502781 METTL9Q9H1A3 318 aa20.75■□□□□ 0.91
LSM6-202ENST00000502781 GSTK1Q9Y2Q3 226 aa20.75■□□□□ 0.91
LSM6-202ENST00000502781 AUP1Q9Y679 476 aa20.75■□□□□ 0.91
LSM6-202ENST00000502781 TMEM82A0PJX8 343 aa20.74■□□□□ 0.91
LSM6-202ENST00000502781 FSHBP01225 129 aa20.74■□□□□ 0.91
LSM6-202ENST00000502781 PPIAL4GP0DN37 164 aa20.74■□□□□ 0.91
LSM6-202ENST00000502781 LMO1P25800 156 aa20.74■□□□□ 0.91
LSM6-202ENST00000502781 DUSP1P28562 367 aa20.74■□□□□ 0.91
LSM6-202ENST00000502781 RSU1Q15404 277 aa20.74■□□□□ 0.91
LSM6-202ENST00000502781 NEDD8Q15843 81 aa20.74■□□□□ 0.91
LSM6-202ENST00000502781 OR4D6Q8NGJ1 314 aa20.74■□□□□ 0.91
LSM6-202ENST00000502781 OR10K1Q8NGX5 313 aa20.74■□□□□ 0.91
LSM6-202ENST00000502781 ZNF780AO75290 641 aaPredicted RBP20.73■□□□□ 0.91
LSM6-202ENST00000502781 NDUFB7P17568 137 aa20.73■□□□□ 0.91
LSM6-202ENST00000502781 NHLRC3Q5JS37 347 aa20.73■□□□□ 0.91
LSM6-202ENST00000502781 C1orf100Q5SVJ3 147 aa20.73■□□□□ 0.91
LSM6-202ENST00000502781 Q6P435 159 aa20.73■□□□□ 0.91
LSM6-202ENST00000502781 C17orf107Q6ZR85 190 aa20.73■□□□□ 0.91
LSM6-202ENST00000502781 TEX29Q8N6K0 151 aa20.73■□□□□ 0.91
LSM6-202ENST00000502781 FOXRED1Q96CU9 486 aaPredicted RBP20.73■□□□□ 0.91
LSM6-202ENST00000502781 SNX22Q96L94 193 aa20.73■□□□□ 0.91
LSM6-202ENST00000502781 MRI1Q9BV20 369 aa20.73■□□□□ 0.91
LSM6-202ENST00000502781 ELL3Q9HB65 397 aaPredicted RBP20.73■□□□□ 0.91
LSM6-202ENST00000502781 GLS2Q9UI32 602 aa20.73■□□□□ 0.91
LSM6-202ENST00000502781 ING4Q9UNL4 249 aa20.73■□□□□ 0.91
LSM6-202ENST00000502781 MRPS28Q9Y2Q9 187 aaKnown RBP20.73■□□□□ 0.91
LSM6-202ENST00000502781 TRBV23-1A0A0A0MS06 115 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 SH2D1BO14796 132 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 OR2H2O95918 312 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 CAPZA1P52907 286 aa20.72■□□□□ 0.91
LSM6-202ENST00000502781 SNU13P55769 128 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms