RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 CD34P28906 385 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 SLC35B1P78383 322 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 PPP1R8Q12972 351 aaKnown RBP12.25□□□□□ -0.45
HDAC6-236ENST00000498808 ZNF260Q3ZCT1 412 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 LCNL1Q6ZST4 164 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 TRAPPC6BQ86SZ2 158 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 STPG2Q8N412 459 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 SPAG4Q9NPE6 437 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 IL36RNQ9UBH0 155 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 A6NIN4 97 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 PRR32B1ATL7 298 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 CCNB2O95067 398 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 IGHG2P01859 326 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 CDK2P24941 298 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 PEX2P28328 305 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 CEACAM3P40198 252 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 MNDAP41218 407 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 HCCSP53701 268 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 CBX1P83916 185 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 KIR2DS1Q14954 304 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 UTF1Q5T230 341 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 OR52W1Q6IF63 320 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 HEPN1Q6WQI6 88 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 SLC35E3Q7Z769 313 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 CEP19Q96LK0 163 aa12.24□□□□□ -0.45
HDAC6-236ENST00000498808 NUFIP1Q9UHK0 495 aaKnown RBP12.24□□□□□ -0.45
HDAC6-236ENST00000498808 UBE2J1Q9Y385 318 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-236ENST00000498808 LINC01548A6NM66 108 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 INMTO95050 263 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 HAND1O96004 215 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 TTRP02766 147 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 FRMD6-AS1P0C7T7 363 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 FAM106CPP0CH98 169 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 GABRR1P24046 479 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 P2RX3P56373 397 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 MFGE8Q08431 387 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-236ENST00000498808 CCDC144NLQ6NUI1 221 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 THNSL2Q86YJ6 484 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 OR56B4Q8NH76 319 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 TRMT10AQ8TBZ6 339 aaKnown RBP12.23□□□□□ -0.45
HDAC6-236ENST00000498808 SLAMF9Q96A28 289 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 DGCR6LQ9BY27 220 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 CADM1Q9BY67 442 aaKnown RBP12.23□□□□□ -0.45
HDAC6-236ENST00000498808 ZMAT4Q9H898 229 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 EDA2RQ9HAV5 297 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 MAGEL2Q9UJ55 1249 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 LAMP5Q9UJQ1 280 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 U3KQV3 271 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 V9GYS6 101 aa12.23□□□□□ -0.45
HDAC6-236ENST00000498808 IGKV1-27A0A075B6S5 117 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 OOSP1A8MZH6 123 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 MGST3O14880 152 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 FGF16O43320 207 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 ERP29P30040 261 aaKnown RBP12.22□□□□□ -0.45
HDAC6-236ENST00000498808 OR3A1P47881 315 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 CDX1P47902 265 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-236ENST00000498808 ESRRGP62508 458 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 ZNF91Q05481 1191 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 FHL3Q13643 280 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 SLX4IPQ5VYV7 408 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 TEX38Q6PEX7 206 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 DEGS2Q6QHC5 323 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 OR14K1Q8NGZ2 314 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 CREB3L1Q96BA8 519 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 NSMCE2Q96MF7 247 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 GAL3ST2Q9H3Q3 398 aa12.22□□□□□ -0.45
HDAC6-236ENST00000498808 SEBOXQ9HB31 216 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-236ENST00000498808 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.22□□□□□ -0.45
HDAC6-236ENST00000498808 PLECQ15149 4684 aaKnown RBP12.22□□□□□ -0.45
HDAC6-236ENST00000498808 A0A1B0GTI1 187 aa12.21□□□□□ -0.45
HDAC6-236ENST00000498808 FAM230AA0A1W2PPH8 454 aa12.21□□□□□ -0.45
HDAC6-236ENST00000498808 PRR23D1E9PI22 279 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-236ENST00000498808 TOR1AO14656 332 aa12.21□□□□□ -0.45
HDAC6-236ENST00000498808 ARPC2O15144 300 aa12.21□□□□□ -0.45
HDAC6-236ENST00000498808 PRODHO43272 600 aa12.21□□□□□ -0.45
HDAC6-236ENST00000498808 PRR23D2P0DMB1 279 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-236ENST00000498808 DUSP1P28562 367 aa12.21□□□□□ -0.45
HDAC6-236ENST00000498808 RBM39Q14498 530 aaKnown RBP12.21□□□□□ -0.45
HDAC6-236ENST00000498808 FOXRED2Q8IWF2 684 aa12.21□□□□□ -0.45
HDAC6-236ENST00000498808 DRAM1Q8N682 238 aa12.21□□□□□ -0.45
HDAC6-236ENST00000498808 BBS1Q8NFJ9 593 aa12.21□□□□□ -0.45
HDAC6-236ENST00000498808 TEX47Q8TBZ9 253 aa12.21□□□□□ -0.45
HDAC6-236ENST00000498808 EMG1Q92979 244 aaKnown RBP12.21□□□□□ -0.45
HDAC6-236ENST00000498808 TTTY10Q9BZA0 68 aa12.21□□□□□ -0.45
HDAC6-236ENST00000498808 A0A087X0M5 115 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 TRGV10A0A0A0MS01 117 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 A0A1B0GX30 115 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 CCRL2O00421 344 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 SRSF10O75494 262 aaKnown RBP12.2□□□□□ -0.46
HDAC6-236ENST00000498808 HCKP08631 526 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 HSD17B1P14061 328 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 TMEM11P17152 192 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 ROM1Q03395 351 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 HNF4GQ14541 408 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 PNLIPRP3Q17RR3 467 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 ZNF829Q3KNS6 432 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-236ENST00000498808 CXorf66Q5JRM2 361 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-236ENST00000498808 RNF152Q8N8N0 203 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 CORO2AQ92828 525 aa12.2□□□□□ -0.46
HDAC6-236ENST00000498808 TOMM40LQ969M1 308 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms