RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 C1QTNF6Q9BXI9 259 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 UGT2B28Q9BY64 529 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 SRXN1Q9BYN0 137 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 UCK2Q9BZX2 261 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 RACGAP1Q9H0H5 632 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 OR51V1Q9H2C8 321 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 TMEM38AQ9H6F2 299 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 RMND5AQ9H871 391 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 REEP1Q9H902 201 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 WDR76Q9H967 626 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 GPN2Q9H9Y4 310 aaPredicted RBP1.89□□□□□ -2.11
RIF1-212ENST00000498041 LPAR2Q9HBW0 351 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 NOX3Q9HBY0 568 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 LYRM4Q9HD34 91 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 POLE4Q9NR33 117 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 C1orf123Q9NWV4 160 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 LYARQ9NX58 379 aaKnown RBP1.89□□□□□ -2.11
RIF1-212ENST00000498041 MED29Q9NX70 200 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 SMPD3Q9NY59 655 aaPredicted RBP1.89□□□□□ -2.11
RIF1-212ENST00000498041 USE1Q9NZ43 259 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 C6orf203Q9P0P8 240 aaPredicted RBP1.89□□□□□ -2.11
RIF1-212ENST00000498041 OR1A1Q9P1Q5 309 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 ONECUT1Q9UBC0 465 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 SEC14L3Q9UDX4 400 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 FBXL3Q9UKT7 428 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 SLC22A13Q9Y226 551 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 TMED5Q9Y3A6 229 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 ZNF337Q9Y3M9 751 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 WDR45Q9Y484 360 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 N6AMT1Q9Y5N5 214 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 HEBP2Q9Y5Z4 205 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 ZNF780BQ9Y6R6 833 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 KALRNO60229 2985 aa1.89□□□□□ -2.11
RIF1-212ENST00000498041 HELZ2Q9BYK8 2649 aaKnown RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 CHD3Q12873 2000 aaKnown RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 IGHV1-45A0A0A0MS14 117 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 IGHV7-81A0A0B4J1V7 117 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 A0A0B4J2E0 115 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 LINC00854A0A1B0GVQ3 168 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 A0A1B0GX12 115 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 A0A1B0GX78 115 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 RNF222A6NCQ9 220 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 TRIM64CA6NLI5 447 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 OR5K4A6NMS3 321 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 GPR89AB7ZAQ6 455 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 H3BN98 237 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 BHLHE40O14503 412 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 POLR1CO15160 346 aaPredicted RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 UPK3AO75631 287 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 CSTAP01040 98 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 PRB2P02812 416 aaPredicted RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 RETP07949 1114 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 SLC35G6P0C7Q6 338 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 GPR89BP0CG08 455 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 LIMS3P0CW19 117 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 LIMS4P0CW20 117 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 HSMCR30P0CW71 290 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 CCL2P13500 99 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 HIST1H1CP16403 213 aaKnown RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 COL8A2P25067 703 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 GTF2E2P29084 291 aaKnown RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 NTSP30990 170 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 HOXA6P31267 233 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 MPIP34949 423 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 HSD17B2P37059 387 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 PEX19P40855 299 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 HSPA13P48723 471 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 NOVA1P51513 510 aaKnown RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 PSMD7P51665 324 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 UCNP55089 124 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 CLDN12P56749 244 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 OR12D2P58182 307 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 RPL8P62917 257 aaKnown RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 DCDP81605 110 aaKnown RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 MXD1Q05195 221 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 PRKCDQ05655 676 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 RPL18Q07020 188 aaKnown RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 ST3GAL4Q11206 333 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 SKP2Q13309 424 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 MED21Q13503 144 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 EXOSC2Q13868 293 aaKnown RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 DGCR6Q14129 220 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 ZNF141Q15928 474 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 AANATQ16613 207 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 ZNF630Q2M218 657 aaPredicted RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 RSPO1Q2MKA7 263 aaPredicted RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 DEFB109BQ30KR1 87 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 SLC25A35Q3KQZ1 300 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 TMEM176BQ3YBM2 270 aaPredicted RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 LIN52Q52LA3 116 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 MESTQ5EB52 335 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 LINC01590Q5TEZ4 76 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 AADACL4Q5VUY2 407 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 C1orf94Q6P1W5 598 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 DHRS4L2Q6PKH6 230 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 WDR74Q6RFH5 385 aaPredicted RBP1.88□□□□□ -2.11
RIF1-212ENST00000498041 TMEM205Q6UW68 189 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 TMEM91Q6ZNR0 172 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 DNM1P46Q6ZS02 220 aa1.88□□□□□ -2.11
RIF1-212ENST00000498041 ABHD13Q7L211 337 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms