RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 F8VVB4 439 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 F8VWA3 439 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 PPIHO43447 177 aaKnown RBP16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 LY6HO94772 140 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 SLC2A2P11168 524 aaPredicted RBP16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 PSG2P11465 335 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 NR4A2P43354 598 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 KCNJ3P48549 501 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 CAV3P56539 151 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 PAX5Q02548 391 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 UNC119Q13432 240 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 ARL6IP1Q15041 203 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 ZMYND11Q15326 602 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 CLEC12BQ2HXU8 276 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 ZNF788Q6ZQV5 615 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 SLC36A1Q7Z2H8 476 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 ZNF561Q8N587 486 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 DMRTB1Q96MA1 342 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 WDR13Q9H1Z4 485 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 MMP27Q9H306 513 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 DCAF16Q9NXF7 216 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 ST3GAL6Q9Y274 331 aa16.52■□□□□ 0.24
SCAMP3-209ENST00000497470 LRBAP50851 2863 aa16.52■□□□□ 0.23
SCAMP3-209ENST00000497470 ANKRD17O75179 2603 aaKnown RBP16.51■□□□□ 0.23
SCAMP3-209ENST00000497470 ASH1LQ9NR48 2969 aaKnown RBP16.51■□□□□ 0.23
SCAMP3-209ENST00000497470 TMEM272A0A1B0GTI8 110 aa16.51■□□□□ 0.23
SCAMP3-209ENST00000497470 POM121CA8CG34 1229 aa16.51■□□□□ 0.23
SCAMP3-209ENST00000497470 LYNX1G3V0Z9 82 aa16.51■□□□□ 0.23
SCAMP3-209ENST00000497470 CRTAPO75718 401 aaPredicted RBP16.51■□□□□ 0.23
SCAMP3-209ENST00000497470 LYNX1P0DP58 116 aa16.51■□□□□ 0.23
SCAMP3-209ENST00000497470 PRKACAP17612 351 aa16.51■□□□□ 0.23
SCAMP3-209ENST00000497470 SERPINA2P20848 420 aa16.51■□□□□ 0.23
SCAMP3-209ENST00000497470 P2RY14Q15391 338 aa16.51■□□□□ 0.23
SCAMP3-209ENST00000497470 TMEM104Q8NE00 496 aa16.51■□□□□ 0.23
SCAMP3-209ENST00000497470 LPAR5Q9H1C0 372 aa16.51■□□□□ 0.23
SCAMP3-209ENST00000497470 ZNF665Q9H7R5 613 aa16.51■□□□□ 0.23
SCAMP3-209ENST00000497470 IGKV1D-17A0A075B6S4 117 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 WNT9BO14905 357 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 SIGLEC5O15389 551 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 APOA1P02647 267 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 PRDX2P32119 198 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 NPY4RP50391 375 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 ART1P52961 327 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 CLDN12P56749 244 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 OR56B1Q8NGI3 324 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 OR5D13Q8NGL4 314 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 PPP1R35Q8TAP8 253 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 ZNF488Q96MN9 340 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 GAL3ST1Q99999 423 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 TMEM246Q9BRR3 403 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 NCOR1P1Q9H4R4 102 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 TREM2Q9NZC2 230 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 RCC2Q9P258 522 aaKnown RBP16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 RABL2AQ9UBK7 228 aaPredicted RBP16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 HSF4Q9ULV5 492 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 RABL2BQ9UNT1 228 aa16.5■□□□□ 0.23
SCAMP3-209ENST00000497470 RFPL4AA6NLU0 287 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 F5H0A9 414 aaPredicted RBP16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 RFPL4AL1F8VTS6 287 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 MPIG6BO95866 241 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 CSN2P05814 226 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 CD80P33681 288 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 UBE2NLQ5JXB2 153 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 Q5PR19 223 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 Q6P435 159 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 KRTAP1-3Q8IUG1 177 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 OR10K1Q8NGX5 313 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 LGALS14Q8TCE9 139 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 SNX22Q96L94 193 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 SELENOIQ9C0D9 397 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 BPESC1Q9GZL8 116 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 PATZ1Q9HBE1 687 aaKnown RBP16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 RHBDL2Q9NX52 303 aa16.49■□□□□ 0.23
SCAMP3-209ENST00000497470 SMIM30A4D0T7 59 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 NKX6-3A6NJ46 265 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 FOXI3A8MTJ6 420 aaPredicted RBP16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 C3orf80F5H4A9 247 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 CA11O75493 328 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 HAND1O96004 215 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 PAHP00439 452 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 HEXAP06865 529 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 WNT2P09544 360 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 SNRPBP14678 240 aaKnown RBP16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 FUT3P21217 361 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 IL13RA1P78552 427 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 LOXL1Q08397 574 aaPredicted RBP16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 NLRC3Q7RTR2 1065 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 FAM46BQ96A09 425 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 RAB39BQ96DA2 213 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 NKX3-1Q99801 234 aaPredicted RBP16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 ADAM30Q9UKF2 790 aa16.48■□□□□ 0.23
SCAMP3-209ENST00000497470 A0A1W2PP11 408 aa16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 CEACAM18A8MTB9 384 aa16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 K7N7A8 449 aa16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 RAB27BO00194 218 aa16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 DEGS1O15121 323 aa16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 ZNF737O75373 536 aa16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 AMY2BP19961 511 aa16.47■□□□□ 0.23
SCAMP3-209ENST00000497470 ERP29P30040 261 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms