RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, human

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-223	ENST00000497318	LCE6A	A0A183	80 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	ARRDC5	A6NEK1	342 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318		H3BN98	237 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	CCL24	O00175	119 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	TOR1A	O14656	332 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	PRODH	O43272	600 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	ZNF254	O75437	659 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	GABRR1	P24046	479 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	HCCS	P53701	268 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	GRK1	Q15835	563 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	TMEM42	Q69YG0	159 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	TCF23	Q7RTU1	214 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	ANGPTL5	Q86XS5	388 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	ENTHD1	Q8IYW4	607 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	ADGRG5	Q8IZF4	528 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	OR5M8	Q8NGP6	311 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	CEP19	Q96LK0	163 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	YIPF3	Q9GZM5	350 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	NUFIP1	Q9UHK0	495 aa	Known RBP	13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	HHLA2	Q9UM44	414 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	SLC7A11	Q9UPY5	501 aa		13.12	□□□□□ -0.31
SUPT20H-223	ENST00000497318	TMEM82	A0PJX8	343 aa		13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	SERPINE3	A8MV23	424 aa		13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	OOSP1	A8MZH6	123 aa		13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	IGLV3-1	P01715	115 aa		13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	PRKACG	P22612	351 aa		13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	PRRX1	P54821	245 aa		13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	RPS7	P62081	194 aa	Known RBP	13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	FAM98B	Q52LJ0	330 aa	Known RBP	13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	SLC35D3	Q5M8T2	416 aa		13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	CD300LD	Q6UXZ3	194 aa		13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	BBS1	Q8NFJ9	593 aa		13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	GIPC3	Q8TF64	312 aa		13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	SEBOX	Q9HB31	216 aa	Predicted RBP	13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.11	□□□□□ -0.31
SUPT20H-223	ENST00000497318	FUOM	A2VDF0	154 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	MGST3	O14880	152 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	CST1	P01037	141 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	HMGN1	P05114	100 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	LUM	P51884	338 aa	Predicted RBP	13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	GINS1	Q14691	196 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	TPTE2P1	Q5T6R2	138 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	TMEM236	Q5W0B7	351 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	EGFL6	Q8IUX8	553 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	TPRX1	Q8N7U7	411 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	OR8U1	Q8NH10	309 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	TRMT10A	Q8TBZ6	339 aa	Known RBP	13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	CANT1	Q8WVQ1	401 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	ASB17	Q8WXJ9	295 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	RAX2	Q96IS3	184 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	RCHY1	Q96PM5	261 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	PCDHB16	Q9NRJ7	776 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	GTF2A1L	Q9UNN4	478 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	TMEM14A	Q9Y6G1	99 aa		13.1	□□□□□ -0.31
SUPT20H-223	ENST00000497318	TRGV10	A0A0A0MS01	117 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	FAM230A	A0A1W2PPH8	454 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	DHRS7C	A6NNS2	312 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	BUB1B-PAK6	H3BSN5	160 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	HAND1	O96004	215 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	IGLV1-47	P01700	117 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	RAP2A	P10114	183 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	CDK2	P24941	298 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	ERP29	P30040	261 aa	Known RBP	13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	MNAT1	P51948	309 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	RIDA	P52758	137 aa	Known RBP	13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	ROM1	Q03395	351 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	KPNB1	Q14974	876 aa	Known RBP	13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	HEPN1	Q6WQI6	88 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	C18orf65	Q6ZTR6	163 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	THNSL2	Q86YJ6	484 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	CPO	Q8IVL8	374 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	FOXRED2	Q8IWF2	684 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318		Q8IYB0	196 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	ZNF679	Q8IYX0	411 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	THTPA	Q9BU02	230 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	TEX12	Q9BXU0	123 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	CHST6	Q9GZX3	395 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	SMAD5-AS1	Q9Y6J3	95 aa		13.09	□□□□□ -0.31
SUPT20H-223	ENST00000497318	PRR32	B1ATL7	298 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	SEC14L6	B5MCN3	397 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	MMP23A	O75900	390 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	CALB2	P22676	271 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	P2RX3	P56373	397 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	ACTR3	P61158	418 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	BCL2L15	Q5TBC7	163 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	PRAMEF5	Q5TYX0	476 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	TEX38	Q6PEX7	206 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	MEPCE	Q7L2J0	689 aa	Known RBP	13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	ARHGAP24	Q8N264	748 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	ASB9	Q96DX5	294 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	NOL4L	Q96MY1	436 aa	Predicted RBP	13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	DUX3	Q96PT4	197 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	GON7	Q9BXV9	100 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	MOB1A	Q9H8S9	216 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	TAS2R3	Q9NYW6	316 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	MTCH1	Q9NZJ7	389 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318		V9GYS6	101 aa		13.08	□□□□□ -0.32
SUPT20H-223	ENST00000497318	IGHA1	P01876	353 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms