RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 PPP1R1AQ13522 171 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 HERPUD1Q15011 391 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 RBMY1FQ15415 496 aaKnown RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 LRRC75BQ2VPJ9 315 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 C6orf99Q4VX62 202 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 SPIN3Q5JUX0 258 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 TSPO2Q5TGU0 170 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 HHATQ5VTY9 493 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 IGFL2Q6UWQ7 119 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 STRADAQ7RTN6 431 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 SLC37A2Q8TED4 501 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 FAM151AQ8WW52 585 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 AP3S1Q92572 193 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 FMC1Q96HJ9 113 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 C18orf15Q96N68 181 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 METTL26Q96S19 204 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 FAAP24Q9BTP7 215 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 OR51E2Q9H255 320 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 SPNS1Q9H2V7 528 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 VSIRQ9H7M9 311 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 PTGES2Q9H7Z7 377 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 EXOSC4Q9NPD3 245 aaKnown RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 HEBP1Q9NRV9 189 aa3.28□□□□□ -1.88
SNX13-211ENST00000496855 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.28□□□□□ -1.88
SNX13-211ENST00000496855 CHD4Q14839 1912 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 NFASCO94856 1347 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 CENPVL3A0A0U1RRI6 287 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 SMIM9A6NGZ8 99 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 EVPLLA8MZ36 301 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 GLSO94925 669 aaPredicted RBP3.27□□□□□ -1.89
SNX13-211ENST00000496855 HSPB1P04792 205 aaKnown RBP3.27□□□□□ -1.89
SNX13-211ENST00000496855 ME2P23368 584 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 RAP1GDS1P52306 607 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 TMEM33P57088 247 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 SLC9A3R2Q15599 337 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 GUK1Q16774 197 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 HACD4Q5VWC8 232 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 METTL21CQ5VZV1 264 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 SPOPLQ6IQ16 392 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 PRSS58Q8IYP2 241 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 C14orf178Q8N769 122 aaPredicted RBP3.27□□□□□ -1.89
SNX13-211ENST00000496855 CCNYL1Q8N7R7 359 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 OR52E4Q8NGH9 312 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 ASB13Q8WXK3 278 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 CCL17Q92583 94 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 RAD51AP1Q96B01 352 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 EBNA1BP2Q99848 306 aaKnown RBP3.27□□□□□ -1.89
SNX13-211ENST00000496855 SUCNR1Q9BXA5 334 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 SLC2A9Q9NRM0 540 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 DNAJC27Q9NZQ0 273 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 RBM12B-AS1Q9P1G2 102 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 TRAPPC4Q9Y296 219 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 TP53TG5Q9Y2B4 290 aa3.27□□□□□ -1.89
SNX13-211ENST00000496855 PALLDQ8WX93 1383 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 PCF11O94913 1555 aaKnown RBP3.26□□□□□ -1.89
SNX13-211ENST00000496855 MFNGO00587 321 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 FFAR1O14842 300 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 CNMDO75829 334 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 BGLAPP02818 100 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 IL6P05231 212 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 RAB3AP20336 220 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 DTYMKP23919 212 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 PYCR1P32322 319 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 TGFBR2P37173 567 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 REG1BP48304 166 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 OR4D2P58180 307 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 VSX2P58304 361 aaPredicted RBP3.26□□□□□ -1.89
SNX13-211ENST00000496855 KRTAP10-8P60410 259 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 SARNPP82979 210 aaKnown RBP3.26□□□□□ -1.89
SNX13-211ENST00000496855 ZNF45Q02386 682 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 OR2F1Q13607 317 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 MOGQ16653 247 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 LAMTOR1Q6IAA8 161 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 CEMP1Q6PRD7 247 aaPredicted RBP3.26□□□□□ -1.89
SNX13-211ENST00000496855 ACP7Q6ZNF0 438 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 CCDC121Q6ZUS5 278 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 GID4Q8IVV7 300 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 UBALD2Q8IYN6 164 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 OR1P1Q8NH06 330 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 KCNS1Q96KK3 526 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 OR10C1Q96KK4 312 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 RILPQ96NA2 401 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 TMEM243Q9BU79 118 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 TLNRD1Q9H1K6 362 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 OR51I1Q9H343 314 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 UVRAGQ9P2Y5 699 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 HEBP2Q9Y5Z4 205 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 VWA8A3KMH1 1905 aa3.26□□□□□ -1.89
SNX13-211ENST00000496855 ADGRL1O94910 1474 aa3.25□□□□□ -1.89
SNX13-211ENST00000496855 CCL15-CCL14A0A0B4J2E2 113 aa3.25□□□□□ -1.89
SNX13-211ENST00000496855 PLAC8L1A1L4L8 177 aa3.25□□□□□ -1.89
SNX13-211ENST00000496855 PHYHO14832 338 aa3.25□□□□□ -1.89
SNX13-211ENST00000496855 PSPHP1O15172 72 aa3.25□□□□□ -1.89
SNX13-211ENST00000496855 GCM2O75603 506 aaPredicted RBP3.25□□□□□ -1.89
SNX13-211ENST00000496855 REM1O75628 298 aa3.25□□□□□ -1.89
SNX13-211ENST00000496855 CNIH1O95406 144 aa3.25□□□□□ -1.89
SNX13-211ENST00000496855 IGLV2-23P01705 113 aa3.25□□□□□ -1.89
SNX13-211ENST00000496855 FABP3P05413 133 aa3.25□□□□□ -1.89
SNX13-211ENST00000496855 TAC1P20366 129 aa3.25□□□□□ -1.89
SNX13-211ENST00000496855 PSMB1P20618 241 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms