RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 TTTY12Q9BZ98 90 aa9.97□□□□□ -0.81
CDCA7-208ENST00000496441 LHX6Q9UPM6 363 aa9.97□□□□□ -0.81
CDCA7-208ENST00000496441 hCG_38984A0A1B0GV85 526 aa9.97□□□□□ -0.81
CDCA7-208ENST00000496441 ALDH3B1P43353 468 aa9.97□□□□□ -0.81
CDCA7-208ENST00000496441 SPIN3Q5JUX0 258 aa9.97□□□□□ -0.81
CDCA7-208ENST00000496441 GGNBP1Q5YKI7 109 aa9.97□□□□□ -0.81
CDCA7-208ENST00000496441 TREM1Q9NP99 234 aa9.97□□□□□ -0.81
CDCA7-208ENST00000496441 C12orf4Q9NQ89 552 aa9.97□□□□□ -0.81
CDCA7-208ENST00000496441 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDCA7-208ENST00000496441 ANAPC10Q9UM13 185 aa9.97□□□□□ -0.81
CDCA7-208ENST00000496441 A0A1B0GW55 424 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 FAM74A7A6NL05 159 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 CYTIPO60759 359 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 LRP3O75074 770 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 TNFSF15O95150 251 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 ACTL6AO96019 429 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 DUX4L2P0CJ85 424 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 DUX4L3P0CJ86 424 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 DUX4L4P0CJ87 422 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 DUX4L5P0CJ88 424 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 DUX4L6P0CJ89 424 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 DUX4L7P0CJ90 424 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 BCL3P20749 454 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 CHATP28329 748 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 FAM74A3Q4VXF1 159 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 HIKESHIQ53FT3 197 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 ABLIM2Q6H8Q1 611 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 PRSS54Q6PEW0 395 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 LHFPL2Q6ZUX7 228 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 ZNF100Q8IYN0 542 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 UBALD1Q8TB05 177 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 IER2Q9BTL4 223 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 LDAHQ9H6V9 325 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 ZNF703Q9H7S9 590 aaPredicted RBP9.96□□□□□ -0.81
CDCA7-208ENST00000496441 NECAP2Q9NVZ3 263 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 C1orf123Q9NWV4 160 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 DUX4Q9UBX2 424 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 PTPRZ1P23471 2315 aaPredicted RBP9.96□□□□□ -0.81
CDCA7-208ENST00000496441 SYNGR4O95473 234 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 PCBD1P61457 104 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 RAB1AP62820 205 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 MALLQ13021 153 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 TSC22D1Q15714 1073 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 MRPL21Q7Z2W9 205 aaKnown RBP9.96□□□□□ -0.81
CDCA7-208ENST00000496441 TMEM251Q8N6I4 163 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 FAM173AQ9BQD7 235 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 CYTL1Q9NRR1 136 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 LIPGQ9Y5X9 500 aa9.96□□□□□ -0.81
CDCA7-208ENST00000496441 PIEZO2Q9H5I5 2752 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 ZNF816-ZNF321PA0A0X1KG74 233 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 HS3ST1O14792 307 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 PHF1O43189 567 aaPredicted RBP9.96□□□□□ -0.82
CDCA7-208ENST00000496441 LILRA1O75019 489 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 MMP7P09237 267 aaPredicted RBP9.96□□□□□ -0.82
CDCA7-208ENST00000496441 LHX2P50458 406 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 Q6ZPA2 131 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 NUFIP2Q7Z417 695 aaKnown RBP9.96□□□□□ -0.82
CDCA7-208ENST00000496441 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.96□□□□□ -0.82
CDCA7-208ENST00000496441 MCEMP1Q8IX19 187 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 PRR18Q8N4B5 295 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 POC1AQ8NBT0 407 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 MARC2Q969Z3 335 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 TSNAXQ99598 290 aaKnown RBP9.96□□□□□ -0.82
CDCA7-208ENST00000496441 FAM117AQ9C073 453 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 BCO1Q9HAY6 547 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 B4GALT7Q9UBV7 327 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 STARD10Q9Y365 291 aa9.96□□□□□ -0.82
CDCA7-208ENST00000496441 TRAV39A0A0B4J263 110 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 K7EPK0 472 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 TNFSF12O43508 249 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 IFNA21P01568 189 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 FUT6P51993 359 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 ZNF169Q14929 603 aaPredicted RBP9.95□□□□□ -0.82
CDCA7-208ENST00000496441 GUCA2BQ16661 112 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 PDSS1Q5T2R2 415 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 C17orf78Q8N4C9 275 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 FAM71E2Q8N5Q1 922 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 SECTM1Q8WVN6 248 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 BSCL2Q96G97 398 aaPredicted RBP9.95□□□□□ -0.82
CDCA7-208ENST00000496441 ZNF552Q9H707 407 aaPredicted RBP9.95□□□□□ -0.82
CDCA7-208ENST00000496441 TAF9BQ9HBM6 251 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 PRSS50Q9UI38 385 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 ATMQ13315 3056 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 CADP27708 2225 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 ABCD4O14678 606 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 SP9P0CG40 484 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 ZNF708P17019 499 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 RPL12P30050 165 aaKnown RBP9.95□□□□□ -0.82
CDCA7-208ENST00000496441 CLDN18P56856 261 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 PMP22Q01453 160 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 SPEM2Q0P670 501 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 PRDX4Q13162 271 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 NSUN5P2Q63ZY6 315 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 SLC2A9Q9NRM0 540 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 MED9Q9NWA0 146 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 KCNIP3Q9Y2W7 256 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 DMXL2Q8TDJ6 3036 aa9.95□□□□□ -0.82
CDCA7-208ENST00000496441 ARGFXA6NJG6 315 aa9.94□□□□□ -0.82
CDCA7-208ENST00000496441 ZNF732B4DXR9 585 aa9.94□□□□□ -0.82
CDCA7-208ENST00000496441 F8W036 122 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms