RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	LINC00696	Q6ZRV3	163 aa		13.25	□□□□□ -0.29
CALD1-222	ENST00000495522	CALHM1	Q8IU99	346 aa		13.25	□□□□□ -0.29
CALD1-222	ENST00000495522	ZNF611	Q8N823	705 aa		13.25	□□□□□ -0.29
CALD1-222	ENST00000495522	OR1S2	Q8NGQ3	325 aa		13.25	□□□□□ -0.29
CALD1-222	ENST00000495522	TOMM40L	Q969M1	308 aa		13.25	□□□□□ -0.29
CALD1-222	ENST00000495522	PRRG4	Q9BZD6	226 aa		13.25	□□□□□ -0.29
CALD1-222	ENST00000495522	TMEM100	Q9NV29	134 aa		13.25	□□□□□ -0.29
CALD1-222	ENST00000495522	ASF1B	Q9NVP2	202 aa		13.25	□□□□□ -0.29
CALD1-222	ENST00000495522	RAB19	A4D1S5	217 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	ZNF724	A8MTY0	619 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	PRSS44	E7EML9	344 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	COX5B	P10606	129 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	FUT3	P21217	361 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	PMEL	P40967	661 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	ABCA11P	Q4W5N1	156 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	TFAP2E	Q6VUC0	442 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	TMEM251	Q8N6I4	163 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	BPIFC	Q8NFQ6	507 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	OR56B2P	Q8NGI1	322 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	RNF141	Q8WVD5	230 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	MARS2	Q96GW9	593 aa	Known RBP	13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	CNTNAP3B	Q96NU0	1288 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	REPIN1	Q9BWE0	567 aa	Known RBP	13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	CNTNAP3	Q9BZ76	1288 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	SLC5A7	Q9GZV3	580 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	RNF122	Q9H9V4	155 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	KCNIP3	Q9Y2W7	256 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	KMT2E	Q8IZD2	1858 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	TTC28	Q96AY4	2481 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM221A	A4D161	298 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	HLA-H	P01893	362 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	APOC3	P02656	99 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	CCNO	P22674	350 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	TMEM211	Q6ICI0	200 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	SLC25A26	Q70HW3	274 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM219A	Q8IW50	185 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	TMED6	Q8WW62	240 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	PAPOLG	Q9BWT3	736 aa	Known RBP	13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	LDAH	Q9H6V9	325 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	NAA60	Q9H7X0	242 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	TUBD1	Q9UJT1	453 aa		13.24	□□□□□ -0.29
CALD1-222	ENST00000495522	C5orf49	A4QMS7	147 aa		13.23	□□□□□ -0.29
CALD1-222	ENST00000495522	TAAR5	O14804	337 aa		13.23	□□□□□ -0.29
CALD1-222	ENST00000495522	FLI1	Q01543	452 aa	Predicted RBP	13.23	□□□□□ -0.29
CALD1-222	ENST00000495522	ZNF273	Q14593	569 aa		13.23	□□□□□ -0.29
CALD1-222	ENST00000495522	GGNBP1	Q5YKI7	109 aa		13.23	□□□□□ -0.29
CALD1-222	ENST00000495522	MRPL24	Q96A35	216 aa	Known RBP	13.23	□□□□□ -0.29
CALD1-222	ENST00000495522	APH1A	Q96BI3	265 aa		13.23	□□□□□ -0.29
CALD1-222	ENST00000495522	GALNT14	Q96FL9	552 aa		13.23	□□□□□ -0.29
CALD1-222	ENST00000495522	ZNF442	Q9H7R0	627 aa		13.23	□□□□□ -0.29
CALD1-222	ENST00000495522	DCAF16	Q9NXF7	216 aa		13.23	□□□□□ -0.29
CALD1-222	ENST00000495522	PQLC2L	A1A4F0	135 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	CDX4	O14627	284 aa	Predicted RBP	13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	OR7C1	O76099	320 aa	Predicted RBP	13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	CD79A	P11912	226 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FCGR2C	P31995	323 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	GLP1R	P43220	463 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FXYD4	P59646	89 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	EIF5A	P63241	154 aa	Known RBP	13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	PRDX4	Q13162	271 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	SMCO1	Q147U7	214 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	PDCD1	Q15116	288 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FOXRED2	Q8IWF2	684 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522		Q8NFD4	153 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	IP6K3	Q96PC2	410 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	STARD10	Q9Y365	291 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A10P	A6NDY2	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A18P	A6NE21	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A16P	A6NEW6	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A20P	A6NIJ5	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A8P	A6NJQ4	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A7P	A6NKC0	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A22P	A8MWA6	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A12P	A8MX19	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A5P	A8MXJ8	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A23P	A8MXZ1	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	ZNF205	O95201	554 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A15P	P0C7V4	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A13P	P0C7W8	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A14P	P0C7W9	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FAM90A24P	P0C7X0	464 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	NPBWR2	P48146	333 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	HOXA1	P49639	335 aa	Predicted RBP	13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FOXG1	P55316	489 aa	Predicted RBP	13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	TMEM187	Q14656	261 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	RNPS1	Q15287	305 aa	Known RBP	13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	FIP1L1	Q6UN15	594 aa	Known RBP	13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	MRPL21	Q7Z2W9	205 aa	Known RBP	13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	TMEM200A	Q86VY9	491 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	MOB3A	Q96BX8	217 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	NARS2	Q96I59	477 aa	Known RBP	13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	SUCNR1	Q9BXA5	334 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	IL17B	Q9UHF5	180 aa		13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.22	□□□□□ -0.29
CALD1-222	ENST00000495522	NUDT19	A8MXV4	375 aa		13.21	□□□□□ -0.29
CALD1-222	ENST00000495522	DEDD	O75618	318 aa		13.21	□□□□□ -0.29
CALD1-222	ENST00000495522	SP1	P08047	785 aa		13.21	□□□□□ -0.29
CALD1-222	ENST00000495522	HKR1	P10072	659 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms