RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 SESN1Q9Y6P5 492 aa10.14□□□□□ -0.79
SKA1-205ENST00000494518 hADV38S2A0JD32 116 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 HAND1O96004 215 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 RBP4P02753 201 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 KRT8P05787 483 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 BCL3P20749 454 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 NPBWR2P48146 333 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 POU3F4P49335 361 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 ACTR3P61158 418 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 KHDC1LQ5JSQ8 128 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 PRAMEF5Q5TYX0 476 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 AADACL4Q5VUY2 407 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 FAHD1Q6P587 224 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 C10orf99Q6UWK7 81 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 TRAPPC6BQ86SZ2 158 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 CATSPERDQ86XM0 798 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 TMEM163Q8TC26 289 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 BCAS4Q8TDM0 211 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 SNX22Q96L94 193 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 OCSTAMPQ9BR26 566 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 CLEC7AQ9BXN2 247 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 TMEM133Q9H2Q1 129 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 RYR3Q15413 4870 aa10.13□□□□□ -0.79
SKA1-205ENST00000494518 TCRBV3S1A0A5B6 114 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 SIRPB1O00241 398 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 PSPNO60542 156 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 DNAJC8O75937 253 aaPredicted RBP10.12□□□□□ -0.79
SKA1-205ENST00000494518 PF4P02776 101 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 CCL1P22362 96 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 PEX2P28328 305 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 CD83Q01151 205 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 MEF2CQ06413 473 aaPredicted RBP10.12□□□□□ -0.79
SKA1-205ENST00000494518 TCTEX1D4Q5JR98 221 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 MINOS1Q5TGZ0 78 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 SLX4IPQ5VYV7 408 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 NXNL2Q5VZ03 156 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 C11orf87Q6NUJ2 197 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 Q6ZSR3 168 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 RDH10Q8IZV5 341 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 RFT1Q96AA3 541 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 BORCS8Q96FH0 119 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 MNTQ99583 582 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 PRRG3Q9BZD7 231 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 KRT84Q9NSB2 600 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 LINC00312Q9Y6C7 94 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 MINOS1-NBL1R4GNA1 71 aa10.12□□□□□ -0.79
SKA1-205ENST00000494518 LOC107986453A0A1B0GWG9 222 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 A0A1W2PQL4 384 aaPredicted RBP10.11□□□□□ -0.79
SKA1-205ENST00000494518 TCRBV4S1A1TA0A5B7 111 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 DHRS7CA6NNS2 312 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 ZAR1LA6NP61 321 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 K7EIL1 84 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 GATBO75879 557 aaKnown RBP10.11□□□□□ -0.79
SKA1-205ENST00000494518 ALDOBP05062 364 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 LPLP06858 475 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 PRKACAP17612 351 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 HTR1DP28221 377 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 GDNFP39905 211 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 OR3A1P47881 315 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 DYNLT3P51808 116 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 FUT6P51993 359 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 ZNF91Q05481 1191 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 ABCA11PQ4W5N1 156 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 C9orf152Q5JTZ5 239 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 C12orf73Q69YU5 71 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 CENPVQ7Z7K6 275 aaPredicted RBP10.11□□□□□ -0.79
SKA1-205ENST00000494518 PRSS35Q8N3Z0 413 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 OR10H4Q8NGA5 316 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 OR4P4Q8NGL7 312 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 DNAJC9Q8WXX5 260 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 NRBF2Q96F24 287 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 ADI1Q9BV57 179 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 CHST5Q9GZS9 411 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 ING3Q9NXR8 418 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 POMPQ9Y244 141 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 TENM3Q9P273 2699 aa10.11□□□□□ -0.79
SKA1-205ENST00000494518 METTL15A6NJ78 407 aa10.1□□□□□ -0.79
SKA1-205ENST00000494518 FAM90A22PA8MWA6 464 aa10.1□□□□□ -0.79
SKA1-205ENST00000494518 GYG2O15488 501 aa10.1□□□□□ -0.79
SKA1-205ENST00000494518 FAM107AO95990 144 aa10.1□□□□□ -0.79
SKA1-205ENST00000494518 KIR3DL2P43630 455 aa10.1□□□□□ -0.79
SKA1-205ENST00000494518 TP53I3Q53FA7 332 aa10.1□□□□□ -0.79
SKA1-205ENST00000494518 RNF144BQ7Z419 303 aa10.1□□□□□ -0.79
SKA1-205ENST00000494518 GID4Q8IVV7 300 aa10.1□□□□□ -0.79
SKA1-205ENST00000494518 FAM58AQ8N1B3 248 aa10.1□□□□□ -0.79
SKA1-205ENST00000494518 CAPSLQ8WWF8 208 aa10.1□□□□□ -0.79
SKA1-205ENST00000494518 MYDGFQ969H8 173 aa10.1□□□□□ -0.79
SKA1-205ENST00000494518 UTP4Q969X6 686 aaKnown RBP10.1□□□□□ -0.79
SKA1-205ENST00000494518 ADAT3Q96EY9 351 aaPredicted RBP10.1□□□□□ -0.79
SKA1-205ENST00000494518 SLC25A33Q9BSK2 321 aa10.1□□□□□ -0.79
SKA1-205ENST00000494518 GNG8Q9UK08 70 aa10.1□□□□□ -0.79
SKA1-205ENST00000494518 IGKV1-9A0A0C4DH69 117 aa10.09□□□□□ -0.79
SKA1-205ENST00000494518 WI2-2373I1.2A0A1W2PRP0 233 aa10.09□□□□□ -0.79
SKA1-205ENST00000494518 MGST3O14880 152 aa10.09□□□□□ -0.79
SKA1-205ENST00000494518 ENTPD6O75354 484 aa10.09□□□□□ -0.79
SKA1-205ENST00000494518 SERPINA3P01011 423 aa10.09□□□□□ -0.79
SKA1-205ENST00000494518 HOXB6P17509 224 aaKnown RBP10.09□□□□□ -0.79
SKA1-205ENST00000494518 CDK2P24941 298 aa10.09□□□□□ -0.79
SKA1-205ENST00000494518 AZGP1P25311 298 aaKnown RBP10.09□□□□□ -0.79
SKA1-205ENST00000494518 HOXD3P31249 432 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms