RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 GIFP27352 417 aa17.45■□□□□ 0.38
KPNA1-210ENST00000494339 APOBEC3AP31941 199 aaPredicted RBP17.45■□□□□ 0.38
KPNA1-210ENST00000494339 RBMXP38159 391 aaKnown RBP17.45■□□□□ 0.38
KPNA1-210ENST00000494339 BTG1P62324 171 aa17.45■□□□□ 0.38
KPNA1-210ENST00000494339 NKAPLQ5M9Q1 402 aa17.45■□□□□ 0.38
KPNA1-210ENST00000494339 TMEM204Q9BSN7 226 aa17.45■□□□□ 0.38
KPNA1-210ENST00000494339 KCNK7Q9Y2U2 307 aa17.45■□□□□ 0.38
KPNA1-210ENST00000494339 UBR5O95071 2799 aaPredicted RBP17.45■□□□□ 0.38
KPNA1-210ENST00000494339 TENM4Q6N022 2769 aa17.45■□□□□ 0.38
KPNA1-210ENST00000494339 UTP20O75691 2785 aaKnown RBP17.45■□□□□ 0.38
KPNA1-210ENST00000494339 FOXI3A8MTJ6 420 aaPredicted RBP17.45■□□□□ 0.38
KPNA1-210ENST00000494339 TCRBP04435 133 aa17.45■□□□□ 0.38
KPNA1-210ENST00000494339 HIST1H1DP16402 221 aaKnown RBP17.45■□□□□ 0.38
KPNA1-210ENST00000494339 ARL6IP1Q15041 203 aa17.45■□□□□ 0.38
KPNA1-210ENST00000494339 ZNF672Q499Z4 452 aaPredicted RBP17.45■□□□□ 0.38
KPNA1-210ENST00000494339 SIGIRRQ6IA17 410 aa17.45■□□□□ 0.38
KPNA1-210ENST00000494339 GLCCI1Q86VQ1 547 aa17.45■□□□□ 0.38
KPNA1-210ENST00000494339 ZCCHC24Q8N2G6 241 aaKnown RBP17.45■□□□□ 0.38
KPNA1-210ENST00000494339 EMG1Q92979 244 aaKnown RBP17.45■□□□□ 0.38
KPNA1-210ENST00000494339 MEGF10Q96KG7 1140 aa17.45■□□□□ 0.38
KPNA1-210ENST00000494339 TLNRD1Q9H1K6 362 aa17.45■□□□□ 0.38
KPNA1-210ENST00000494339 hCG_1807616A0A1W2PRN6 198 aa17.44■□□□□ 0.38
KPNA1-210ENST00000494339 INMT-MINDY4F8WBC2 141 aa17.44■□□□□ 0.38
KPNA1-210ENST00000494339 M0R233 179 aa17.44■□□□□ 0.38
KPNA1-210ENST00000494339 FCER2P06734 321 aa17.44■□□□□ 0.38
KPNA1-210ENST00000494339 TNFAIP6P98066 277 aaPredicted RBP17.44■□□□□ 0.38
KPNA1-210ENST00000494339 HOXA4Q00056 320 aaPredicted RBP17.44■□□□□ 0.38
KPNA1-210ENST00000494339 WDR82Q6UXN9 313 aa17.44■□□□□ 0.38
KPNA1-210ENST00000494339 C6orf201Q7Z4U5 140 aa17.44■□□□□ 0.38
KPNA1-210ENST00000494339 FAM58AQ8N1B3 248 aa17.44■□□□□ 0.38
KPNA1-210ENST00000494339 ITLN1Q8WWA0 313 aa17.44■□□□□ 0.38
KPNA1-210ENST00000494339 C1orf123Q9NWV4 160 aa17.44■□□□□ 0.38
KPNA1-210ENST00000494339 ZDHHC8Q9ULC8 765 aa17.44■□□□□ 0.38
KPNA1-210ENST00000494339 OR7C1O76099 320 aaPredicted RBP17.43■□□□□ 0.38
KPNA1-210ENST00000494339 AKAIN1P0CW23 69 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 PGA5P0DJD9 388 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 IGFBP2P18065 325 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 DUSP1P28562 367 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 TAS2R19P59542 299 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 DAZAP2Q15038 168 aaPredicted RBP17.43■□□□□ 0.38
KPNA1-210ENST00000494339 PNLIPRP3Q17RR3 467 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 TMEM229BQ8NBD8 167 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 NUDCD2Q8WVJ2 157 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 NRIP2Q9BQI9 281 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 PECRQ9BY49 303 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.43■□□□□ 0.382e-6■■■■□ 26.4
KPNA1-210ENST00000494339 PLEKHJ1Q9NW61 149 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 MFNGO00587 321 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 RAG2P55895 527 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 ERVK11-1P61568 191 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 TATDN3Q17R31 274 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 BTN2A1Q7KYR7 527 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 FAM222BQ8WU58 562 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 POM121Q96HA1 1249 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 DHRS9Q9BPW9 319 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 ARFGEF3Q5TH69 2177 aa17.43■□□□□ 0.38
KPNA1-210ENST00000494339 C17orf100A8MU93 164 aa17.42■□□□□ 0.38
KPNA1-210ENST00000494339 NXPH2O95156 264 aa17.42■□□□□ 0.38
KPNA1-210ENST00000494339 PTBP3O95758 552 aaKnown RBP17.42■□□□□ 0.38
KPNA1-210ENST00000494339 HNRNPCP07910 306 aaKnown RBP eCLIP17.42■□□□□ 0.38
KPNA1-210ENST00000494339 TNFSF4P23510 183 aa17.42■□□□□ 0.38
KPNA1-210ENST00000494339 RCVRNP35243 200 aa17.42■□□□□ 0.38
KPNA1-210ENST00000494339 BRICD5Q6PL45 260 aa17.42■□□□□ 0.38
KPNA1-210ENST00000494339 MOGAT3Q86VF5 341 aa17.42■□□□□ 0.38
KPNA1-210ENST00000494339 Q8IYB0 196 aa17.42■□□□□ 0.38
KPNA1-210ENST00000494339 NUDT15Q9NV35 164 aa17.42■□□□□ 0.38
KPNA1-210ENST00000494339 MCUBQ9NWR8 336 aa17.42■□□□□ 0.38
KPNA1-210ENST00000494339 IL19Q9UHD0 177 aa17.42■□□□□ 0.38
KPNA1-210ENST00000494339 DOPEY1Q5JWR5 2465 aa17.42■□□□□ 0.38
KPNA1-210ENST00000494339 SPTAN1Q13813 2472 aaKnown RBP17.42■□□□□ 0.38
KPNA1-210ENST00000494339 DHFRP00374 187 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 CCR6P51684 374 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 CCL8P80075 99 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 EFNB3Q15768 340 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 MST1LQ2TV78 715 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 C11orf91Q3C1V1 193 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 NHLRC3Q5JS37 347 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 MUC15Q8N387 334 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 POC1AQ8NBT0 407 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 WDR13Q9H1Z4 485 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 DYNLRB1Q9NP97 96 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 WNT9BO14905 357 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 HLA-DMAP28067 261 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 CHATP28329 748 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 GNG2P59768 71 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 IKZF1Q13422 519 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 ATAD3CQ5T2N8 411 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 SFRP4Q6FHJ7 346 aaPredicted RBP17.41■□□□□ 0.38
KPNA1-210ENST00000494339 STEAP1BQ6NZ63 245 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 TRAPPC6BQ86SZ2 158 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 OR56B4Q8NH76 319 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 LRRC29Q8WV35 223 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 FAAP24Q9BTP7 215 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 RHOFQ9HBH0 211 aa17.41■□□□□ 0.38
KPNA1-210ENST00000494339 A0A0B4J293 547 aa17.4■□□□□ 0.38
KPNA1-210ENST00000494339 B9A039 149 aa17.4■□□□□ 0.38
KPNA1-210ENST00000494339 TRAPPC2P0DI81 140 aa17.4■□□□□ 0.38
KPNA1-210ENST00000494339 TRAPPC2BP0DI82 140 aa17.4■□□□□ 0.38
KPNA1-210ENST00000494339 ARFRP1Q13795 201 aa17.4■□□□□ 0.38
KPNA1-210ENST00000494339 CARTPTQ16568 116 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms