RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 NAXEQ8NCW5 288 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 ADPRHL1Q8NDY3 354 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 OR8G5Q8NG78 346 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 OR56B1Q8NGI3 324 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 OR4A4PQ8NGN8 299 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 OR4K15Q8NH41 348 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 ST7LQ8TDW4 575 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 PAQR8Q8TEZ7 354 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 EMG1Q92979 244 aaKnown RBP9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 SARAFQ96BY9 339 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 AMELYQ99218 206 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 MICU1Q9BPX6 476 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 PTDSS2Q9BVG9 487 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 ZNF230Q9UIE0 474 aaPredicted RBP9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 SLC22A13Q9Y226 551 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 DTX4Q9Y2E6 619 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 NOSIPQ9Y314 301 aaKnown RBP9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 TIMM10BQ9Y5J6 103 aa9.2□□□□□ -0.94
PDLIM1-205ENST00000493949 DYSFO75923 2080 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 MEIS3P1A6NDR6 274 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 RNASEK-C17orf49H0YIS7 233 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 TGFBR3LH3BV60 316 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 PLPP3O14495 311 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 PRKNO60260 465 aaPredicted RBP9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 H2BFMP0C1H6 154 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 HKR1P10072 659 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 NR2C1P13056 603 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 PAX1P15863 534 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 HIST1H1DP16402 221 aaKnown RBP9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 IL12BP29460 328 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 HRH1P35367 487 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 MAS1LP35410 378 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 RPL35P42766 123 aaKnown RBP9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 ZNF84P51523 738 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 MFGE8Q08431 387 aaPredicted RBP9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 IL15RAQ13261 267 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 ELAVL1Q15717 326 aaKnown RBP9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 HYAL4Q2M3T9 481 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 MST1LQ2TV78 715 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 GFOD2Q3B7J2 385 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 LRRC37A5PQ49AS3 106 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 DNLZQ5SXM8 178 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 C1orf140Q5VVS0 124 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 C1QL4Q86Z23 238 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 ZSCAN4Q8NAM6 433 aaPredicted RBP9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 OR2M7Q8NG81 312 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 MFSD8Q8NHS3 518 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 MRGPRFQ96AM1 343 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 PERPQ96FX8 193 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 RNF126Q9BV68 326 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 TTTY12Q9BZ98 90 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 SLC5A7Q9GZV3 580 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 TLNRD1Q9H1K6 362 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 ACKR4Q9NPB9 350 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 FAM212BQ9NTI7 297 aaPredicted RBP9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 C1orf123Q9NWV4 160 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 JKAMPQ9P055 326 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 TMED7Q9Y3B3 224 aa9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 STRAPQ9Y3F4 350 aaKnown RBP9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 YLPM1P49750 1951 aaKnown RBP9.19□□□□□ -0.94
PDLIM1-205ENST00000493949 TMED7-TICAM2A0A0A6YYA0 188 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 TMEM269A0A1B0GVZ9 245 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 A0A1W2PNV4 684 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 C5orf52A6NGY3 159 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 SERPINE3A8MV23 424 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 C17orf105B2RV13 164 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 H7C1C5 153 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 WRBO00258 174 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 TSPAN2O60636 221 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 IGKV3-11P04433 115 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 CRYBA1P05813 215 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 S100A6P06703 90 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 FCGR3AP08637 254 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 CELA3AP09093 270 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 SEC11BP0C7V7 166 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 SPP1P10451 314 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 NAT2P11245 290 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 RCC1P18754 421 aaPredicted RBP9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 CCL1P22362 96 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 TIMP3P35625 211 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 GLP1RP43220 463 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 CD81P60033 236 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 LCN6P62502 163 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 PLGLB1Q02325 96 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 ZNF117Q03924 483 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 TMEM268Q5VZI3 342 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 OR10K2Q6IF99 312 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 CORO6Q6QEF8 472 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 BTNL8Q6UX41 500 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 TMEM251Q8N6I4 163 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 UBAC2Q8NBM4 344 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 POC1AQ8NBT0 407 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 NFAM1Q8NET5 270 aaPredicted RBP9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 OR4D6Q8NGJ1 314 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 OR5H2Q8NGV7 314 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 RXFP4Q8TDU9 374 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 TMED6Q8WW62 240 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 IGFBPL1Q8WX77 278 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 ASB10Q8WXI3 467 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms