RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 NEIL1Q96FI4 390 aaPredicted RBP12.51□□□□□ -0.41
ACTB-213ENST00000493945 ZNF488Q96MN9 340 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 CMTM3Q96MX0 182 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 GFI1Q99684 422 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 SELENOIQ9C0D9 397 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 SPATA2Q9UM82 520 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 FLNBO75369 2602 aaKnown RBP12.51□□□□□ -0.41
ACTB-213ENST00000493945 TACC2O95359 2948 aa12.51□□□□□ -0.41
ACTB-213ENST00000493945 POLQO75417 2590 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 FBN2P35556 2912 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 A0A0G2JK05 382 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 RFPL4AA6NLU0 287 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 TMEM14DPA8MWL7 114 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 RFPL4AL1F8VTS6 287 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 WNT9BO14905 357 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 DEGS1O15121 323 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 GPR37O15354 613 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 TMPRSS2O15393 492 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 ADAM20O43506 726 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 NDUFB3O43676 98 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 OR7C1O76099 320 aaPredicted RBP12.5□□□□□ -0.41
ACTB-213ENST00000493945 CLEC2LP0C7M8 214 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 VSIG8P0DPA2 414 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 USF1P22415 310 aaPredicted RBP12.5□□□□□ -0.41
ACTB-213ENST00000493945 TGFBR1P36897 503 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 NPBWR2P48146 333 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 KCNJ3P48549 501 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 CLDN12P56749 244 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 RPS27AP62979 156 aaKnown RBP12.5□□□□□ -0.41
ACTB-213ENST00000493945 MRPS15P82914 257 aaKnown RBP12.5□□□□□ -0.41
ACTB-213ENST00000493945 RBM39Q14498 530 aaKnown RBP12.5□□□□□ -0.41
ACTB-213ENST00000493945 SPCS2Q15005 226 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 C11orf91Q3C1V1 193 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 C2orf76Q3KRA6 126 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 ESCO2Q56NI9 601 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 STUMQ69YW2 141 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 ASCC1Q8N9N2 400 aaKnown RBP12.5□□□□□ -0.41
ACTB-213ENST00000493945 OR5D13Q8NGL4 314 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 LGALS14Q8TCE9 139 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 NEDD4LQ96PU5 975 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 FAM234AQ9H0X4 552 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 WDR13Q9H1Z4 485 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 KAAG1Q9UBP8 84 aa12.5□□□□□ -0.41
ACTB-213ENST00000493945 IGHV3OR15-7A0A075B7D8 119 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 A0A0A6YYH2 397 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 A6NJ64 397 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 GYPAP02724 150 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 SLC2A2P11168 524 aaPredicted RBP12.49□□□□□ -0.41
ACTB-213ENST00000493945 PSG2P11465 335 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 PRDX2P32119 198 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 TALDO1P37837 337 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 SNU13P55769 128 aaKnown RBP12.49□□□□□ -0.41
ACTB-213ENST00000493945 CAV3P56539 151 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 UBE2NLQ5JXB2 153 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 ATPAF1Q5TC12 328 aaPredicted RBP12.49□□□□□ -0.41
ACTB-213ENST00000493945 CRIP3Q6Q6R5 217 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 DNM1P46Q6ZS02 220 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 C1QL2Q7Z5L3 287 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 BATF2Q8N1L9 274 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 ANGPTL6Q8NI99 470 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 NEK7Q8TDX7 302 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 RAB40AQ8WXH6 277 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 SLC25A28Q96A46 364 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 Q96MF0 132 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 NKX3-1Q99801 234 aaPredicted RBP12.49□□□□□ -0.41
ACTB-213ENST00000493945 TMEM246Q9BRR3 403 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 BANF2Q9H503 90 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 IFT22Q9H7X7 185 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 TMEM165Q9HC07 324 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 DIABLOQ9NR28 239 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 ITGB1BP2Q9UKP3 347 aa12.49□□□□□ -0.41
ACTB-213ENST00000493945 IGHV4-30-2A0A087WSY4 118 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 TMEM272A0A1B0GTI8 110 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 CEACAM18A8MTB9 384 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 VWC2LB2RUY7 222 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.48□□□□□ -0.41
ACTB-213ENST00000493945 H7C1Q1 480 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 SIGLEC5O15389 551 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 ZNF205O95201 554 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 GLAP06280 429 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 SNRPBP14678 240 aaKnown RBP12.48□□□□□ -0.41
ACTB-213ENST00000493945 GABRR1P24046 479 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 S100A5P33763 92 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 PITPNBP48739 271 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 GNB2P62879 340 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 PAN3Q58A45 887 aaKnown RBP12.48□□□□□ -0.41
ACTB-213ENST00000493945 FAM201AQ5SY85 155 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 ATAD3CQ5T2N8 411 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 NR2C2APQ86WQ0 139 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 TGIF2LYQ8IUE0 185 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 TMEM185AQ8NFB2 350 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 DYNC2LI1Q8TCX1 351 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 SDSLQ96GA7 329 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 SNX22Q96L94 193 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 Q96M66 194 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 DCUN1D5Q9BTE7 237 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 TM2D1Q9BX74 207 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 NARFLQ9H6Q4 476 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 PATZ1Q9HBE1 687 aaKnown RBP12.48□□□□□ -0.41
ACTB-213ENST00000493945 RHBDL2Q9NX52 303 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms