RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 RHOFQ9HBH0 211 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 IL36RNQ9UBH0 155 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 PSORS1C1Q9UIG5 152 aa18.54■□□□□ 0.56
SNIP1-203ENST00000493916 IGKV1-12A0A0C4DH73 117 aa18.53■□□□□ 0.56
SNIP1-203ENST00000493916 HAND1O96004 215 aa18.53■□□□□ 0.56
SNIP1-203ENST00000493916 IGKV1D-12P01611 117 aa18.53■□□□□ 0.56
SNIP1-203ENST00000493916 EEF1B2P24534 225 aaKnown RBP18.53■□□□□ 0.56
SNIP1-203ENST00000493916 UBE2E1P51965 193 aa18.53■□□□□ 0.56
SNIP1-203ENST00000493916 DLX1P56177 255 aa18.53■□□□□ 0.56
SNIP1-203ENST00000493916 KLRD1Q13241 179 aa18.53■□□□□ 0.56
SNIP1-203ENST00000493916 TMEM200BQ69YZ2 307 aa18.53■□□□□ 0.56
SNIP1-203ENST00000493916 OR8H2Q8N162 312 aa18.53■□□□□ 0.56
SNIP1-203ENST00000493916 ZNF485Q8NCK3 441 aa18.53■□□□□ 0.56
SNIP1-203ENST00000493916 OR4M1Q8NGD0 313 aa18.53■□□□□ 0.56
SNIP1-203ENST00000493916 HMG20AQ9NP66 347 aa18.53■□□□□ 0.56
SNIP1-203ENST00000493916 POMT1Q9Y6A1 747 aa18.53■□□□□ 0.56
SNIP1-203ENST00000493916 SIRT4Q9Y6E7 314 aaPredicted RBP18.53■□□□□ 0.56
SNIP1-203ENST00000493916 H0YJX3 145 aa18.52■□□□□ 0.56
SNIP1-203ENST00000493916 NPFFO15130 113 aa18.52■□□□□ 0.56
SNIP1-203ENST00000493916 ANGPTL7O43827 346 aa18.52■□□□□ 0.56
SNIP1-203ENST00000493916 XPNPEP2O43895 674 aa18.52■□□□□ 0.56
SNIP1-203ENST00000493916 LALBAP00709 142 aa18.52■□□□□ 0.56
SNIP1-203ENST00000493916 CD2P06729 351 aa18.52■□□□□ 0.56
SNIP1-203ENST00000493916 HCKP08631 526 aa18.52■□□□□ 0.56
SNIP1-203ENST00000493916 PRKACAP17612 351 aa18.52■□□□□ 0.56
SNIP1-203ENST00000493916 PRB3Q04118 309 aaPredicted RBP18.52■□□□□ 0.56
SNIP1-203ENST00000493916 KISS1Q15726 138 aa18.52■□□□□ 0.56
SNIP1-203ENST00000493916 RNF144BQ7Z419 303 aa18.52■□□□□ 0.56
SNIP1-203ENST00000493916 ZSCAN4Q8NAM6 433 aaPredicted RBP18.52■□□□□ 0.56
SNIP1-203ENST00000493916 SSMEM1Q8WWF3 244 aa18.52■□□□□ 0.56
SNIP1-203ENST00000493916 CPNE2Q96FN4 548 aaPredicted RBP18.52■□□□□ 0.56
SNIP1-203ENST00000493916 SNX22Q96L94 193 aa18.52■□□□□ 0.56
SNIP1-203ENST00000493916 GLS2Q9UI32 602 aa18.52■□□□□ 0.56
SNIP1-203ENST00000493916 TMEM82A0PJX8 343 aa18.51■□□□□ 0.55
SNIP1-203ENST00000493916 RAB3AP20336 220 aa18.51■□□□□ 0.55
SNIP1-203ENST00000493916 ZP1P60852 638 aa18.51■□□□□ 0.55
SNIP1-203ENST00000493916 ACSM1Q08AH1 577 aa18.51■□□□□ 0.55
SNIP1-203ENST00000493916 DMKNQ6E0U4 476 aaPredicted RBP18.51■□□□□ 0.55
SNIP1-203ENST00000493916 ASPHD2Q6ICH7 369 aa18.51■□□□□ 0.55
SNIP1-203ENST00000493916 HCP5Q6MZN7 132 aa18.51■□□□□ 0.55
SNIP1-203ENST00000493916 C16orf87Q6PH81 154 aa18.51■□□□□ 0.55
SNIP1-203ENST00000493916 C17orf107Q6ZR85 190 aa18.51■□□□□ 0.55
SNIP1-203ENST00000493916 C11orf42Q8N5U0 333 aa18.51■□□□□ 0.55
SNIP1-203ENST00000493916 OR5D18Q8NGL1 313 aa18.51■□□□□ 0.55
SNIP1-203ENST00000493916 NRG4Q8WWG1 115 aa18.51■□□□□ 0.55
SNIP1-203ENST00000493916 ZNF281Q9Y2X9 895 aa18.51■□□□□ 0.55
SNIP1-203ENST00000493916 hCG_1809904A0A1W2PP81 198 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 A0A1W2PPE2 198 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 A0A1W2PR64 198 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 A0A1W2PRV1 198 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 SOX2P48431 317 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 FOXL1Q12952 345 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 ZNF273Q14593 569 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 AWAT1Q58HT5 328 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 AHSA2Q719I0 299 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 GDPD3Q7L5L3 318 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 TMEM106AQ96A25 262 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 FKBP14Q9NWM8 211 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 TAS2R4Q9NYW5 299 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 SF3B6Q9Y3B4 125 aaKnown RBP18.5■□□□□ 0.55
SNIP1-203ENST00000493916 FAM96BQ9Y3D0 163 aa18.5■□□□□ 0.55
SNIP1-203ENST00000493916 ERICH4A6NGS2 130 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 FBP1P09467 338 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 CCL3L1P16619 93 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 CFPP27918 469 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 SAA4P35542 130 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 IER3P46695 156 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 AQP4P55087 323 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 DLX6P56179 175 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 TAS2R43P59537 309 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 MEF2CQ06413 473 aaPredicted RBP18.49■□□□□ 0.55
SNIP1-203ENST00000493916 STX19Q8N4C7 294 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 BPIFB6Q8NFQ5 453 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 OR51A2Q8NGJ7 313 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 GHSRQ92847 366 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 PCDHGB5Q9Y5G0 923 aa18.49■□□□□ 0.55
SNIP1-203ENST00000493916 TRBV5-5A0A0J9YX44 114 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 MAGEB3O15480 346 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 PSPNO60542 156 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 RBP4P02753 201 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 TMEM225BP0DP42 221 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 CALCBP10092 127 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 GABRR1P24046 479 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 DUSP1P28562 367 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 EDDM3BP56851 147 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 GRK1Q15835 563 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 MIDNQ504T8 468 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 YIF1BQ5BJH7 314 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 PNKDQ8N490 385 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 OR52N4Q8NGI2 321 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 PGLYRP3Q96LB9 341 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 CHIAQ9BZP6 476 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 EXOSC4Q9NPD3 245 aaKnown RBP18.48■□□□□ 0.55
SNIP1-203ENST00000493916 ZNRD1Q9P1U0 126 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 GSTK1Q9Y2Q3 226 aa18.48■□□□□ 0.55
SNIP1-203ENST00000493916 A0A1W2PRD5 423 aa18.47■□□□□ 0.55
SNIP1-203ENST00000493916 A0A1W2PRF3 423 aa18.47■□□□□ 0.55
SNIP1-203ENST00000493916 A0A1W2PRM7 423 aa18.47■□□□□ 0.55
SNIP1-203ENST00000493916 MEIOCA2RUB1 952 aa18.47■□□□□ 0.55
SNIP1-203ENST00000493916 C17orf98A8MV24 154 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms