RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 CCDC54Q8NEL0 328 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 OR52I1Q8NGK6 324 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 OR5D13Q8NGL4 314 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 OR13C3Q8NGS6 347 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 OR4F5Q8NH21 305 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 PP6455Q8WZ26 134 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 DYRK2Q92630 601 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 EMG1Q92979 244 aaKnown RBP8.69□□□□□ -1.02
COL6A3-214ENST00000493608 CHST6Q9GZX3 395 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 DPAGT1Q9H3H5 408 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 LIN7BQ9HAP6 207 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 BEX1Q9HBH7 125 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 RBFOX1Q9NWB1 397 aaKnown RBP8.69□□□□□ -1.02
COL6A3-214ENST00000493608 ERVK13-1Q9NX77 482 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 CAB39Q9Y376 341 aaPredicted RBP8.69□□□□□ -1.02
COL6A3-214ENST00000493608 SF3B6Q9Y3B4 125 aaKnown RBP8.69□□□□□ -1.02
COL6A3-214ENST00000493608 TMEM82A0PJX8 343 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 EIF4EBP3O60516 100 aaPredicted RBP8.68□□□□□ -1.02
COL6A3-214ENST00000493608 ZNF737O75373 536 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 CLIC3O95833 236 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 ISG15P05161 165 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 CHRM2P08172 466 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 OCM2P0CE71 109 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 OCMP0CE72 109 aaPredicted RBP8.68□□□□□ -1.02
COL6A3-214ENST00000493608 CCR9P51686 369 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 BMXP51813 675 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 EDDM3AQ14507 147 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 LY6EQ16553 131 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 OLFML2AQ68BL7 652 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 OR52N4Q8NGI2 321 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 OR5D18Q8NGL1 313 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 OR13C9Q8NGT0 318 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 FBLIM1Q8WUP2 373 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 APH1BQ8WW43 257 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 C10orf35Q96D05 121 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 AJUBAQ96IF1 538 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 Q96MT0 163 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 PDCD1LG2Q9BQ51 273 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 ZNF649Q9BS31 505 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 HHLA2Q9UM44 414 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 MMP24Q9Y5R2 645 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 PKD1L1Q8TDX9 2849 aa8.68□□□□□ -1.02
COL6A3-214ENST00000493608 IGKV1-12A0A0C4DH73 117 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 A0A1W2PPH5 198 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 CLPSL1A2RUU4 121 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 BTBD17A6NE02 478 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 H3BUX3 64 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 MPZL2O60487 215 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 NDUFA7O95182 113 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 FADS2O95864 444 aaKnown RBP8.67□□□□□ -1.02
COL6A3-214ENST00000493608 HAND1O96004 215 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 IGKV1D-12P01611 117 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 PRKACAP17612 351 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 PRKACBP22694 351 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 GABRR1P24046 479 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 GTF2A1P52655 376 aaPredicted RBP8.67□□□□□ -1.02
COL6A3-214ENST00000493608 KRTAP10-3P60369 221 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 ACTA2P62736 377 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 ACTG2P63267 376 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 ACSM1Q08AH1 577 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 PDZK1IP1Q13113 114 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 PLA1AQ53H76 456 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 LPCAT4Q643R3 524 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 C17orf107Q6ZR85 190 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 Q6ZSV7 163 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 UTS2BQ765I0 119 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 GDPD3Q7L5L3 318 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 LHFPL4Q7Z7J7 247 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 FAM58AQ8N1B3 248 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 DNAAF1Q8NEP3 725 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 ZNF555Q8NEP9 628 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 LINC01006Q8NI28 216 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 CNIH3Q8TBE1 160 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 STMN2Q93045 179 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 MRPL48Q96GC5 212 aaKnown RBP8.67□□□□□ -1.02
COL6A3-214ENST00000493608 SNX22Q96L94 193 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 OPALINQ96PE5 141 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 SSX3Q99909 188 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 FAM234AQ9H0X4 552 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 SLITRK2Q9H156 845 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 ZCCHC4Q9H5U6 513 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 HEXA-AS1Q9H8Q6 139 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 SMPD3Q9NY59 655 aaPredicted RBP8.67□□□□□ -1.02
COL6A3-214ENST00000493608 GSTK1Q9Y2Q3 226 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 RPL36Q9Y3U8 105 aaKnown RBP8.67□□□□□ -1.02
COL6A3-214ENST00000493608 RNF114Q9Y508 228 aa8.67□□□□□ -1.02
COL6A3-214ENST00000493608 MGAM2Q2M2H8 2515 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 A0A1B0GUS0 222 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 ANKRD65E5RJM6 399 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 SIRPB1O00241 398 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 PSPNO60542 156 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 WBP4O75554 376 aaKnown RBP8.66□□□□□ -1.02
COL6A3-214ENST00000493608 ZFPL1O95159 310 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 CYB5AP00167 134 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 LIMS3P0CW19 117 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 LIMS4P0CW20 117 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 ETV1P50549 477 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 GBX2P52951 348 aaPredicted RBP8.66□□□□□ -1.02
COL6A3-214ENST00000493608 DLX6P56179 175 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 LGALS4P56470 323 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms