RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 KPRPQ5T749 579 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-212ENST00000492407 SLC35E4Q6ICL7 350 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 DUX4L9Q6RFH8 374 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-212ENST00000492407 SLC16A12Q6ZSM3 486 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 Q6ZTK2 550 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 PIGWQ7Z7B1 504 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 DHFR2Q86XF0 187 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 CALHM1Q8IU99 346 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 GID4Q8IVV7 300 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 PDZD9Q8IXQ8 264 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 ZDHHC23Q8IYP9 409 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 CENPSQ8N2Z9 138 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 ASCC1Q8N9N2 400 aaKnown RBP7.46□□□□□ -1.22
HDAC3-212ENST00000492407 CCDC197Q8NCU1 140 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 OR5A2Q8NGI9 324 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 OR5K1Q8NHB7 308 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 CFHR4Q92496 578 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 H1FXQ92522 213 aaKnown RBP7.46□□□□□ -1.22
HDAC3-212ENST00000492407 OR51I2Q9H344 312 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 HEXA-AS1Q9H8Q6 139 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 DUX4Q9UBX2 424 aa7.46□□□□□ -1.22
HDAC3-212ENST00000492407 MRPS7Q9Y2R9 242 aaKnown RBP7.46□□□□□ -1.22
HDAC3-212ENST00000492407 A0A1W2PQ09 198 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 ZNF320A2RRD8 509 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 ZNF729A6NN14 1252 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-212ENST00000492407 ZNF701M0R085 212 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-212ENST00000492407 GPX5O75715 221 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 SULT1C4O75897 302 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 RAP2AP10114 183 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 NDUFB7P17568 137 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 ATP6V1B2P21281 511 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 GLRA1P23415 457 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 ACKR3P25106 362 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 POU1F1P28069 291 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 TAGLN2P37802 199 aaKnown RBP7.45□□□□□ -1.22
HDAC3-212ENST00000492407 FHITP49789 147 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 MEOX2P50222 304 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 RASSF2P50749 326 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 EFNB2P52799 333 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 EGR3Q06889 387 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 SMCO1Q147U7 214 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 KCTD18Q6PI47 426 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-212ENST00000492407 CYP2R1Q6VVX0 501 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 REC114Q7Z4M0 266 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 FGFRL1Q8N441 504 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 OR10G2Q8NGC3 310 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 OR5T2Q8NGG2 359 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 OR52M1Q8NGK5 317 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 OR4C13Q8NGP0 309 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 RNASE11Q8TAA1 199 aaKnown RBP7.45□□□□□ -1.22
HDAC3-212ENST00000492407 DTD1Q8TEA8 209 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 THEM6Q8WUY1 208 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 PIGCQ92535 297 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 RPL3LQ92901 407 aaKnown RBP7.45□□□□□ -1.22
HDAC3-212ENST00000492407 PPP1R14AQ96A00 147 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 SEH1LQ96EE3 360 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 DUS3LQ96G46 650 aaKnown RBP7.45□□□□□ -1.22
HDAC3-212ENST00000492407 AMELYQ99218 206 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 FEVQ99581 238 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 CHID1Q9BWS9 393 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 TEX12Q9BXU0 123 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 WDR13Q9H1Z4 485 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 IFT46Q9NQC8 304 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 ARL8BQ9NVJ2 186 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 DNAJC27Q9NZQ0 273 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 RSL24D1Q9UHA3 163 aaKnown RBP7.45□□□□□ -1.22
HDAC3-212ENST00000492407 ZNF222Q9UK12 451 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 ZNF281Q9Y2X9 895 aa7.45□□□□□ -1.22
HDAC3-212ENST00000492407 PUS1Q9Y606 427 aaKnown RBP eCLIP7.45□□□□□ -1.22
HDAC3-212ENST00000492407 IGKV1D-17A0A075B6S4 117 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 FAM183AA6NL82 134 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 H0YAE9 185 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 H3BN98 237 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 H3BUX3 64 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 UBE2CO00762 179 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 SOX14O95416 240 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 TSPAN15O95858 294 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 PSG2P11465 335 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 ALOX5APP20292 161 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 GNG10P50151 68 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 LUMP51884 338 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-212ENST00000492407 CDK5Q00535 292 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 ROM1Q03395 351 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 LRRC75BQ2VPJ9 315 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 DDI2Q5TDH0 399 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 HCP5Q6MZN7 132 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 ZFP1Q6P2D0 407 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 CRIP3Q6Q6R5 217 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 KCTD8Q6ZWB6 473 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 ZNF561Q8N587 486 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 OR51G2Q8NGK0 314 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 OR2T6Q8NHC8 308 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 FAM110DQ8TAY7 271 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-212ENST00000492407 HPSE2Q8WWQ2 592 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 ASB17Q8WXJ9 295 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 AQP3Q92482 292 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 ASB9Q96DX5 294 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 LYZL4Q96KX0 146 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 SSX3Q99909 188 aa7.44□□□□□ -1.22
HDAC3-212ENST00000492407 NIPSNAP1Q9BPW8 284 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms