RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 RNF222A6NCQ9 220 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 F5H0A9 414 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-219ENST00000491747 IGKV3-15P01624 115 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 SOD3P08294 240 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 CECR9P0C854 216 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 DANCRP0C864 163 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 ZNF735P0CB33 412 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 CDAP32320 146 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 RIDAP52758 137 aaKnown RBP8.08□□□□□ -1.12
BRCA1-219ENST00000491747 ROM1Q03395 351 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 SLC25A47Q6Q0C1 308 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 SLC22A24Q8N4F4 322 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 PTX4Q96A99 478 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 PHB2Q99623 299 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 CXXC4Q9H2H0 198 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 CISD1Q9NZ45 108 aaKnown RBP8.08□□□□□ -1.12
BRCA1-219ENST00000491747 PCDHB10Q9UN67 800 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 SLC22A13Q9Y226 551 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 PRRC2AP48634 2157 aaKnown RBP8.08□□□□□ -1.12
BRCA1-219ENST00000491747 PCP4L1A6NKN8 68 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 DOK2O60496 412 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 GPANK1O95872 356 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 SPARCP09486 303 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 H2AFB1P0C5Y9 115 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 CD79AP11912 226 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 CBR1P16152 277 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 RNASE10Q5GAN6 216 aaKnown RBP8.07□□□□□ -1.12
BRCA1-219ENST00000491747 C10orf128Q5T292 105 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 ASPHD2Q6ICH7 369 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 RAB12Q6IQ22 244 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 SLC22A25Q6T423 547 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 C20orf204Q6ZNR8 217 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 LYG2Q86SG7 212 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 OR13C8Q8NGS7 320 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 CCL19Q99731 98 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 FOXC2Q99958 501 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 GAL3ST1Q99999 423 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 SAV1Q9H4B6 383 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-219ENST00000491747 MLXQ9UH92 298 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 TMEM218A2RU14 115 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 PRSS37A4D1T9 235 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 METTL21EPA6NDL7 271 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 OR2AT4A6NND4 320 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 SIGLEC5O15389 551 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 PNPP00491 289 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 IGFBP3P17936 291 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-219ENST00000491747 IDH3GP51553 393 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-219ENST00000491747 ARHGDIBP52566 201 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 ATP1B3P54709 279 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 IL13RA1P78552 427 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 NAAAQ02083 359 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 ATXN7L3Q14CW9 347 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-219ENST00000491747 SHEQ5VZ18 495 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 FAHD2BQ6P2I3 314 aaPredicted RBP8.07□□□□□ -1.12
BRCA1-219ENST00000491747 SLC25A42Q86VD7 318 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 KRTAP1-3Q8IUG1 177 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 SPAG16Q8N0X2 631 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 JAGN1Q8N5M9 183 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 NKAIN3Q8N8D7 197 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 ZDHHC22Q8N966 263 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 MITD1Q8WV92 249 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 NABP1Q96AH0 204 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 FAHD2AQ96GK7 314 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 SEC22AQ96IW7 307 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 SLC6A7Q99884 636 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 TAS2R4Q9NYW5 299 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 HHLA2Q9UM44 414 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 B9D1Q9UPM9 204 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 LAMP3Q9UQV4 416 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 CREBBPQ92793 2442 aa8.07□□□□□ -1.12
BRCA1-219ENST00000491747 CCDC168Q8NDH2 2452 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 CCSO14618 274 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 CSN2P05814 226 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 CD37P11049 281 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 ZNF14P17017 642 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-219ENST00000491747 ZBTB25P24278 435 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 MPZP25189 248 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 BDKRB2P30411 391 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 RAB1AP62820 205 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 CTAG1AP78358 180 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 C3orf36Q3SXR2 165 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 CDNFQ49AH0 187 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 HAGHLQ6PII5 290 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-219ENST00000491747 LRRC18Q8N456 261 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 FAM169BQ8N8A8 192 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 OR1S2Q8NGQ3 325 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 FOXRED1Q96CU9 486 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-219ENST00000491747 ZMAT3Q9HA38 289 aaKnown RBP8.06□□□□□ -1.12
BRCA1-219ENST00000491747 CGGBP1Q9UFW8 167 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-219ENST00000491747 ATP23Q9Y6H3 246 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 ZNF469Q96JG9 3925 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-219ENST00000491747 C9orf170A2RU37 121 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 TMEM235A6NFC5 223 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 A6NIZ1 184 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 NUDT19A8MXV4 375 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 FAM25EA8MYX2 175 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 LDLRAD4O15165 306 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 SLC16A7O60669 478 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 TPT1P13693 172 aaKnown RBP8.06□□□□□ -1.12
BRCA1-219ENST00000491747 RAB6AP20340 208 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms