RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 E5RGE8 158 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 C11orf98E9PRG8 122 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 TOX3O15405 576 aaPredicted RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 YKT6O15498 198 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 RRP8O43159 456 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ST8SIA3O43173 380 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 HSPA12AO43301 675 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 MBTPS2O43462 519 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 TGOLN2O43493 480 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 HCRTR2O43614 444 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 GATCO43716 136 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 GMFGO60234 142 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ZIC3O60481 467 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ALOX12BO75342 701 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF217O75362 1048 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 VAMP5O95183 116 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 AHSA1O95433 338 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 CLDN14O95500 239 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 KLF8O95600 359 aaPredicted RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 NUDT14O95848 222 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 IGLV3-19P01714 112 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PMP2P02689 132 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 TTRP02766 147 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 IGKV3-11P04433 115 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 DCNP07585 359 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SP1P08047 785 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 HOXB5P09067 269 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SPARCP09486 303 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 CTXN2P0C2S0 81 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM90A15PP0C7V4 464 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM90A14PP0C7W9 464 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 DANCRP0C864 163 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PGA3P0DJD8 388 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 GIMD1P0DJR0 217 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC2A1P11166 492 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 NR2C1P13056 603 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 MMP9P14780 707 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PVRP15151 417 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 AGAP20933 346 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 GNLYP22749 145 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 FCARP24071 287 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PTAFRP25105 342 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 IL12BP29460 328 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 RPL12P30050 165 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 GRPRP30550 384 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 FCGR2CP31995 323 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SNCAP37840 140 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 EIF2S3P41091 472 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 EIF1P41567 113 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PTGFRP43088 359 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 GLP1RP43220 463 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 GABRA4P48169 554 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 KCNJ3P48549 501 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 CSNK1A1P48729 337 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 DHPSP49366 369 aaPredicted RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 AKR1D1P51857 326 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 LUMP51884 338 aaPredicted RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SUCLG1P53597 346 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 F2RL1P55085 397 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 STARD6P59095 220 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 TAS2R46P59540 309 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 RAB2AP61019 212 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 POLR2GP62487 172 aaKnown RBP eCLIP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PPIAP62937 165 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 GRB2P62993 217 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF117Q03924 483 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SPOCK1Q08629 439 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SRSF5Q13243 272 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SKP2Q13309 424 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PPP1R1AQ13522 171 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ARFRP1Q13795 201 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 FZD2Q14332 565 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 RHEBQ15382 184 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 RSU1Q15404 277 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 NSDHLQ15738 373 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF528Q3MIS6 628 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 CHRFAM7AQ494W8 412 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 MESTQ5EB52 335 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC25A53Q5H9E4 307 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 BEX5Q5H9J7 111 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 TCEAL5Q5H9L2 206 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM109BQ6ICB4 259 aaPredicted RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM211Q6ICI0 200 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OR10K2Q6IF99 312 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ADAM5Q6NVV9 412 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 FAAP20Q6NZ36 180 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 RPUSD3Q6P087 351 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 WDR73Q6P4I2 378 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 PAPD4Q6PIY7 484 aaKnown RBP1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC25A47Q6Q0C1 308 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 CORO6Q6QEF8 472 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC22A25Q6T423 547 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 OPN5Q6U736 354 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 GLIPR1L1Q6UWM5 242 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 CLEC18BQ6UXF7 455 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 NPSR1Q6W5P4 371 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 ASCL4Q6XD76 172 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 C9orf139Q6ZV77 190 aa1.76□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC35D2Q76EJ3 337 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms