RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 FUT6P51993 359 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 ACTC1P68032 377 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 ACTA1P68133 377 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 CDK5R1Q15078 307 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 SMN1Q16637 294 aaKnown RBP9.53□□□□□ -0.88
SRSF4-204ENST00000489898 LRRC75BQ2VPJ9 315 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 DHRS7BQ6IAN0 325 aaPredicted RBP9.53□□□□□ -0.88
SRSF4-204ENST00000489898 LAIR2Q6ISS4 152 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 Q6P435 159 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 Q6ZS46 218 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 ZNF485Q8NCK3 441 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 CCDC54Q8NEL0 328 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 OR4P4Q8NGL7 312 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 RFKQ969G6 155 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 SPACA5Q96QH8 159 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 SSX3Q99909 188 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 JAM3Q9BX67 310 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 CHST6Q9GZX3 395 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 DPAGT1Q9H3H5 408 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 SERTAD4Q9NUC0 356 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 H2AFY2Q9P0M6 372 aaPredicted RBP9.53□□□□□ -0.88
SRSF4-204ENST00000489898 ZNF581Q9P0T4 197 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 FBLN5Q9UBX5 448 aa9.53□□□□□ -0.88
SRSF4-204ENST00000489898 A6NDX4 124 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 HAND1O96004 215 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 ZNF728P0DKX0 622 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 CALCBP10092 127 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 ATF1P18846 271 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 DUSP1P28562 367 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 IL18R1Q13478 541 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 RIPK1Q13546 671 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 GALEQ14376 348 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 LY6EQ16553 131 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 ZFP1Q6P2D0 407 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 SYS1Q8N2H4 156 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 PQLC1Q8N2U9 271 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 ASCC1Q8N9N2 400 aaKnown RBP9.52□□□□□ -0.89
SRSF4-204ENST00000489898 OR51A2Q8NGJ7 313 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 OR52I1Q8NGK6 324 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 OR13C9Q8NGT0 318 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 RFT1Q96AA3 541 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 OPALINQ96PE5 141 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 NKX3-1Q99801 234 aaPredicted RBP9.52□□□□□ -0.89
SRSF4-204ENST00000489898 ALG8Q9BVK2 526 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 PPA2Q9H2U2 334 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 PLEKHA1Q9HB21 404 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 S100A14Q9HCY8 104 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 HMG20AQ9NP66 347 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 ERVK13-1Q9NX77 482 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 FOXJ3Q9UPW0 622 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 TCF19Q9Y242 345 aa9.52□□□□□ -0.89
SRSF4-204ENST00000489898 SIRT4Q9Y6E7 314 aaPredicted RBP9.52□□□□□ -0.89
SRSF4-204ENST00000489898 IGHV2-26A0A0B4J1V2 119 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 H0YAE9 185 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 ATP6V1G2O95670 118 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 IGLV1-47P01700 117 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 CGB3P0DN86 165 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 CGB7P0DN87 165 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 EEF1B2P24534 225 aaKnown RBP9.51□□□□□ -0.89
SRSF4-204ENST00000489898 LMO1P25800 156 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 TGFBR2P37173 567 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 PDZK1IP1Q13113 114 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 ALKBH1Q13686 389 aaKnown RBP9.51□□□□□ -0.89
SRSF4-204ENST00000489898 HABP2Q14520 560 aaPredicted RBP9.51□□□□□ -0.89
SRSF4-204ENST00000489898 CNN3Q15417 329 aaKnown RBP9.51□□□□□ -0.89
SRSF4-204ENST00000489898 MEDAGQ5VYS4 303 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 PARP16Q8N5Y8 322 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 ACBD7Q8N6N7 88 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 Q8NFD4 153 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 OR5D18Q8NGL1 313 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 EMG1Q92979 244 aaKnown RBP9.51□□□□□ -0.89
SRSF4-204ENST00000489898 SPSB1Q96BD6 273 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 FGGYQ96C11 551 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 BORCS8Q96FH0 119 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 SNX22Q96L94 193 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 PDCD1LG2Q9BQ51 273 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 MMP27Q9H306 513 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 RANBP3Q9H6Z4 567 aaPredicted RBP9.51□□□□□ -0.89
SRSF4-204ENST00000489898 AMBNQ9NP70 447 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 FAM118AQ9NWS6 357 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 IMPAD1Q9NX62 359 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 SF3B6Q9Y3B4 125 aaKnown RBP9.51□□□□□ -0.89
SRSF4-204ENST00000489898 FAM96BQ9Y3D0 163 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 LINC00312Q9Y6C7 94 aa9.51□□□□□ -0.89
SRSF4-204ENST00000489898 NOTCH3Q9UM47 2321 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 MAGEA13PA6NCF6 341 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 FAM90A22PA8MWA6 464 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 INMTO95050 263 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 OR2H2O95918 312 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 CSN2P05814 226 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 CHRM2P08172 466 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 KIR2DS4P43632 304 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 POU3F4P49335 361 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 RBP2P50120 134 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 RAB13P51153 203 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 DYNLT3P51808 116 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 GTF2A1P52655 376 aaPredicted RBP9.5□□□□□ -0.89
SRSF4-204ENST00000489898 CAPZA1P52907 286 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 P2RX3P56373 397 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 MEF2CQ06413 473 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms