RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 IL19Q9UHD0 177 aa18.32■□□□□ 0.52
SMC4-221ENST00000489573 CACNG2Q9Y698 323 aa18.32■□□□□ 0.52
SMC4-221ENST00000489573 ZNF462Q96JM2 2506 aa18.31■□□□□ 0.52
SMC4-221ENST00000489573 hCG_1807616A0A1W2PRN6 198 aa18.31■□□□□ 0.52
SMC4-221ENST00000489573 ANKRD20A5PA0PJZ0 165 aa18.31■□□□□ 0.52
SMC4-221ENST00000489573 PDCD6O75340 191 aa18.31■□□□□ 0.52
SMC4-221ENST00000489573 NXPH2O95156 264 aa18.31■□□□□ 0.52
SMC4-221ENST00000489573 IGFBP2P18065 325 aa18.31■□□□□ 0.52
SMC4-221ENST00000489573 DYRK1AQ13627 763 aa18.31■□□□□ 0.52
SMC4-221ENST00000489573 ARFRP1Q13795 201 aa18.31■□□□□ 0.52
SMC4-221ENST00000489573 C7orf50Q9BRJ6 194 aaKnown RBP18.31■□□□□ 0.52
SMC4-221ENST00000489573 FN3KRPQ9HA64 309 aa18.31■□□□□ 0.52
SMC4-221ENST00000489573 C17orf100A8MU93 164 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 SSX5O60225 188 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 CA11O75493 328 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 CSF1P09603 554 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 GATA4P43694 442 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 PDCD1Q15116 288 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 PCGF3Q3KNV8 242 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 GDPD3Q7L5L3 318 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 CYYR1Q96J86 154 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 HELZ2Q9BYK8 2649 aaKnown RBP18.3■□□□□ 0.52
SMC4-221ENST00000489573 HES4Q9HCC6 221 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 CENPXA8MT69 81 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 B9A039 149 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 H3BUI4 141 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 SSX4O60224 188 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 CD55P08174 381 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 FUT3P21217 361 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 RCVRNP35243 200 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 RFX2P48378 723 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 IKZF1Q13422 519 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 SPRNQ5BIV9 151 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 ATAD3CQ5T2N8 411 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 FIP1L1Q6UN15 594 aaKnown RBP18.3■□□□□ 0.52
SMC4-221ENST00000489573 NRARPQ7Z6K4 114 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 OR10Z1Q8NGY1 313 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 DYNLRB1Q9NP97 96 aa18.3■□□□□ 0.52
SMC4-221ENST00000489573 TPD52L2O43399 206 aaKnown RBP18.29■□□□□ 0.52
SMC4-221ENST00000489573 GMFBP60983 142 aa18.29■□□□□ 0.52
SMC4-221ENST00000489573 Q6ZNX1 250 aa18.29■□□□□ 0.52
SMC4-221ENST00000489573 MOGAT3Q86VF5 341 aa18.29■□□□□ 0.52
SMC4-221ENST00000489573 LRRC29Q8WV35 223 aa18.29■□□□□ 0.52
SMC4-221ENST00000489573 SULT4A1Q9BR01 284 aa18.29■□□□□ 0.52
SMC4-221ENST00000489573 IFT46Q9NQC8 304 aa18.29■□□□□ 0.52
SMC4-221ENST00000489573 RCC2Q9P258 522 aaKnown RBP18.29■□□□□ 0.52
SMC4-221ENST00000489573 PLCE1Q9P212 2302 aa18.29■□□□□ 0.52
SMC4-221ENST00000489573 ANKHD1Q8IWZ3 2542 aaKnown RBP18.28■□□□□ 0.52
SMC4-221ENST00000489573 C3orf80F5H4A9 247 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 PLA2G2AP14555 144 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 SPNP16150 400 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 DUSP1P28562 367 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 CFHR2P36980 270 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 CBX5P45973 191 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 MST1LQ2TV78 715 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 SPIN3Q5JUX0 258 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 ENKURQ8TC29 256 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 DEDD2Q8WXF8 326 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 FAAP24Q9BTP7 215 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 SPACA1Q9HBV2 294 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 ZNF107Q9UII5 783 aaPredicted RBP18.28■□□□□ 0.52
SMC4-221ENST00000489573 TENM4Q6N022 2769 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 RELNP78509 3460 aa18.28■□□□□ 0.52
SMC4-221ENST00000489573 GLRA1P23415 457 aa18.27■□□□□ 0.52
SMC4-221ENST00000489573 PMELP40967 661 aa18.27■□□□□ 0.52
SMC4-221ENST00000489573 TAS2R19P59542 299 aa18.27■□□□□ 0.52
SMC4-221ENST00000489573 TESK1Q15569 626 aa18.27■□□□□ 0.52
SMC4-221ENST00000489573 FAM209AQ5JX71 171 aa18.27■□□□□ 0.52
SMC4-221ENST00000489573 MUC15Q8N387 334 aa18.27■□□□□ 0.52
SMC4-221ENST00000489573 TMEM229BQ8NBD8 167 aa18.27■□□□□ 0.52
SMC4-221ENST00000489573 ERGIC1Q969X5 290 aa18.27■□□□□ 0.52
SMC4-221ENST00000489573 IFT22Q9H7X7 185 aa18.27■□□□□ 0.52
SMC4-221ENST00000489573 HRASLSQ9HDD0 168 aa18.27■□□□□ 0.52
SMC4-221ENST00000489573 AK3Q9UIJ7 227 aa18.27■□□□□ 0.52
SMC4-221ENST00000489573 ANAPC10Q9UM13 185 aa18.27■□□□□ 0.52
SMC4-221ENST00000489573 PYCARD-AS1I3L0S3 204 aa18.26■□□□□ 0.51
SMC4-221ENST00000489573 WNT9BO14905 357 aa18.26■□□□□ 0.51
SMC4-221ENST00000489573 MT-ND4P03905 459 aa18.26■□□□□ 0.51
SMC4-221ENST00000489573 FCER2P06734 321 aa18.26■□□□□ 0.51
SMC4-221ENST00000489573 TNFRSF1AP19438 455 aa18.26■□□□□ 0.51
SMC4-221ENST00000489573 ZNF146Q15072 292 aa18.26■□□□□ 0.51
SMC4-221ENST00000489573 ACP7Q6ZNF0 438 aa18.26■□□□□ 0.51
SMC4-221ENST00000489573 GVQW1Q8N7I0 195 aa18.26■□□□□ 0.51
SMC4-221ENST00000489573 OCSTAMPQ9BR26 566 aa18.26■□□□□ 0.51
SMC4-221ENST00000489573 MS4A5Q9H3V2 200 aa18.26■□□□□ 0.51
SMC4-221ENST00000489573 PLEKHA6Q9Y2H5 1048 aa18.26■□□□□ 0.51
SMC4-221ENST00000489573 A0A1B0GVG6 124 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 FAM240BA0A1B0GVZ2 78 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 NAP1L6A6NFF2 107 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 SRRM5B3KS81 715 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 RNF224P0DH78 156 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 FAUP35544 74 aaKnown RBP18.25■□□□□ 0.51
SMC4-221ENST00000489573 MRPS15P82914 257 aaKnown RBP18.25■□□□□ 0.51
SMC4-221ENST00000489573 SWI5Q1ZZU3 235 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 SMIM21Q3B7S5 101 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 Q6P435 159 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 BRICD5Q6PL45 260 aa18.25■□□□□ 0.51
SMC4-221ENST00000489573 CCBE1Q6UXH8 406 aaPredicted RBP18.25■□□□□ 0.51
SMC4-221ENST00000489573 CMSS1Q9BQ75 279 aaKnown RBP18.25■□□□□ 0.51
SMC4-221ENST00000489573 WDR13Q9H1Z4 485 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms