RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 C1orf122Q6ZSJ8 110 aa11.01□□□□□ -0.65
CCL28-202ENST00000489442 GDPD3Q7L5L3 318 aa11.01□□□□□ -0.65
CCL28-202ENST00000489442 ZFP41Q8N8Y5 198 aa11.01□□□□□ -0.65
CCL28-202ENST00000489442 ZDHHC22Q8N966 263 aa11.01□□□□□ -0.65
CCL28-202ENST00000489442 ZSCAN4Q8NAM6 433 aaPredicted RBP11.01□□□□□ -0.65
CCL28-202ENST00000489442 GHSRQ92847 366 aa11.01□□□□□ -0.65
CCL28-202ENST00000489442 GCDHQ92947 438 aaPredicted RBP11.01□□□□□ -0.65
CCL28-202ENST00000489442 MYDGFQ969H8 173 aa11.01□□□□□ -0.65
CCL28-202ENST00000489442 TMEM106AQ96A25 262 aa11.01□□□□□ -0.65
CCL28-202ENST00000489442 SLC25A28Q96A46 364 aa11.01□□□□□ -0.65
CCL28-202ENST00000489442 ZNF48Q96MX3 618 aaPredicted RBP11.01□□□□□ -0.65
CCL28-202ENST00000489442 METTL8Q9H825 291 aaKnown RBP11.01□□□□□ -0.65
CCL28-202ENST00000489442 C19orf12Q9NSK7 152 aa11.01□□□□□ -0.65
CCL28-202ENST00000489442 FAM96BQ9Y3D0 163 aa11.01□□□□□ -0.65
CCL28-202ENST00000489442 SIRT4Q9Y6E7 314 aaPredicted RBP11.01□□□□□ -0.65
CCL28-202ENST00000489442 DNHD1Q96M86 4753 aa11□□□□□ -0.65
CCL28-202ENST00000489442 PNMA8CA0A1B0GUJ8 204 aa11□□□□□ -0.65
CCL28-202ENST00000489442 MDFIC2A0A1B0GVS7 189 aa11□□□□□ -0.65
CCL28-202ENST00000489442 DNAJC9-AS1A6NH13 148 aa11□□□□□ -0.65
CCL28-202ENST00000489442 SH2D1BO14796 132 aa11□□□□□ -0.65
CCL28-202ENST00000489442 HAND1O96004 215 aa11□□□□□ -0.65
CCL28-202ENST00000489442 LALBAP00709 142 aa11□□□□□ -0.65
CCL28-202ENST00000489442 GABRR1P24046 479 aa11□□□□□ -0.65
CCL28-202ENST00000489442 DUSP1P28562 367 aa11□□□□□ -0.65
CCL28-202ENST00000489442 WNT4P56705 351 aa11□□□□□ -0.65
CCL28-202ENST00000489442 EDDM3BP56851 147 aa11□□□□□ -0.65
CCL28-202ENST00000489442 NCR3LG1Q68D85 454 aa11□□□□□ -0.65
CCL28-202ENST00000489442 SAXO1Q8IYX7 474 aa11□□□□□ -0.65
CCL28-202ENST00000489442 OR5D13Q8NGL4 314 aa11□□□□□ -0.65
CCL28-202ENST00000489442 RGP1Q92546 391 aaPredicted RBP11□□□□□ -0.65
CCL28-202ENST00000489442 SNX22Q96L94 193 aa11□□□□□ -0.65
CCL28-202ENST00000489442 ZMAT3Q9HA38 289 aaKnown RBP11□□□□□ -0.65
CCL28-202ENST00000489442 TAS2R4Q9NYW5 299 aa11□□□□□ -0.65
CCL28-202ENST00000489442 GSTK1Q9Y2Q3 226 aa11□□□□□ -0.65
CCL28-202ENST00000489442 A0A1W2PRD5 423 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 A0A1W2PRF3 423 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 A0A1W2PRM7 423 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 HSPA13P48723 471 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 PRB3Q04118 309 aaPredicted RBP10.99□□□□□ -0.65
CCL28-202ENST00000489442 SCN1BQ07699 218 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 EDDM3AQ14507 147 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 YIF1BQ5BJH7 314 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 SPIN3Q5JUX0 258 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 TMEM200BQ69YZ2 307 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 DMKNQ6E0U4 476 aaPredicted RBP10.99□□□□□ -0.65
CCL28-202ENST00000489442 C12orf54Q6X4T0 127 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 RNF144BQ7Z419 303 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 OR8H2Q8N162 312 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 Q8N7P7 452 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 NANOGP1Q8N7R0 232 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 PPP1R35Q8TAP8 253 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 RPS4Y2Q8TD47 263 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 FAM192AQ9GZU8 254 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 RHOFQ9HBH0 211 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 HMG20AQ9NP66 347 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 EXOSC4Q9NPD3 245 aaKnown RBP10.99□□□□□ -0.65
CCL28-202ENST00000489442 NOX4Q9NPH5 578 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 IL36RNQ9UBH0 155 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 CKLFQ9UBR5 152 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 TPRKBQ9Y3C4 175 aa10.99□□□□□ -0.65
CCL28-202ENST00000489442 IGKV1-12A0A0C4DH73 117 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 HOXA3O43365 443 aaPredicted RBP10.98□□□□□ -0.65
CCL28-202ENST00000489442 KDM4BO94953 1096 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 IGKV1D-12P01611 117 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 CDK1P06493 297 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 CELP19835 753 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 DLX1P56177 255 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 KLRD1Q13241 179 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 ZNF146Q15072 292 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 SLC9A3R2Q15599 337 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 GRK1Q15835 563 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 TUSC1Q2TAM9 212 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 Q499Y3 187 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 METAP1DQ6UB28 335 aaPredicted RBP10.98□□□□□ -0.65
CCL28-202ENST00000489442 IZUMO2Q6UXV1 221 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 ZNF485Q8NCK3 441 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 OR51A2Q8NGJ7 313 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 OR13C5Q8NGS8 318 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 TNFAIP8L1Q8WVP5 186 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 S100A13Q99584 98 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 MND1Q9BWT6 205 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 CHST6Q9GZX3 395 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 TMEM138Q9NPI0 162 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 TNFRSF19Q9NS68 423 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 FKBP14Q9NWM8 211 aa10.98□□□□□ -0.65
CCL28-202ENST00000489442 A0A0U1RQK1 487 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 TMEM82A0PJX8 343 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 MEIOCA2RUB1 952 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 RNASEK-C17orf49H0YIS7 233 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 SIRPB1O00241 398 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 NPFFO15130 113 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 ZNF737O75373 536 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 PAHP00439 452 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 ZNF44P15621 663 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 MYF6P23409 242 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 BDKRB2P30411 391 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 BMXP51813 675 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 UBE2E1P51965 193 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 RIPK1Q13546 671 aa10.97□□□□□ -0.65
CCL28-202ENST00000489442 RSU1Q15404 277 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms