RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CCDC28BQ9BUN5 200 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 OR52D1Q9H346 318 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 ANKRD19PQ9H560 264 aa7.1□□□□□ -1.27
SSBP1-212ENST00000489378 DYNC1H1Q14204 4646 aaKnown RBP7.09□□□□□ -1.27
SSBP1-212ENST00000489378 DNAH6Q9C0G6 4158 aa7.09□□□□□ -1.27
SSBP1-212ENST00000489378 TRBV4-1A0A0J9YWV2 114 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 hADV38S2A0JD32 116 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 TMEM82A0PJX8 343 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 TMEM120BA0PK00 339 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 BUB1B-PAK6H3BSN5 160 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 PSMD9O00233 223 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 OVOL1O14753 267 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 RRP9O43818 475 aaKnown RBP7.09□□□□□ -1.28
SSBP1-212ENST00000489378 DEDDO75618 318 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 ELANEP08246 267 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 GDNFP39905 211 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 MNDAP41218 407 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 GABPB1Q06547 395 aaPredicted RBP7.09□□□□□ -1.28
SSBP1-212ENST00000489378 HNF4GQ14541 408 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 FGD3Q5JSP0 725 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 UTF1Q5T230 341 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 FAM53AQ6NSI3 398 aaPredicted RBP7.09□□□□□ -1.28
SSBP1-212ENST00000489378 ERICH5Q6P6B1 374 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 MOB3CQ70IA8 216 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 HAPLN4Q86UW8 402 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 LYPD6Q86Y78 171 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 OR6Q1Q8NGQ2 317 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 OR56B4Q8NH76 319 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 ZNF596Q8TC21 504 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 LRGUKQ96M69 825 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 AMELYQ99218 206 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 NABP2Q9BQ15 211 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 KRTAP4-5Q9BYR2 181 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 GNB4Q9HAV0 340 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 ZNF286AQ9HBT8 521 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 HES4Q9HCC6 221 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 LINC00312Q9Y6C7 94 aa7.09□□□□□ -1.28
SSBP1-212ENST00000489378 OR5B21A6NL26 309 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 FXYD1O00168 92 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 AP4M1O00189 453 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 FGF16O43320 207 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 NOS1APO75052 506 aaPredicted RBP7.08□□□□□ -1.28
SSBP1-212ENST00000489378 H1F0P07305 194 aaKnown RBP7.08□□□□□ -1.28
SSBP1-212ENST00000489378 TMEM11P17152 192 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 CEACAM3P40198 252 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 GPR12P47775 334 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 GNB1P62873 340 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 CFHR3Q02985 330 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 ZNF616Q08AN1 781 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 TMED1Q13445 227 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 DGCR6Q14129 220 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 HLA-DRB5Q30154 266 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 RTN4RL2Q86UN3 420 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 CATSPERDQ86XM0 798 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 SGPP2Q8IWX5 399 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 OR5A2Q8NGI9 324 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 OR2T4Q8NH00 348 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 TRMT10AQ8TBZ6 339 aaKnown RBP7.08□□□□□ -1.28
SSBP1-212ENST00000489378 RNF133Q8WVZ7 376 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 DLX4Q92988 240 aaPredicted RBP7.08□□□□□ -1.28
SSBP1-212ENST00000489378 OR5B12Q96R08 314 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 VIPAS39Q9H9C1 493 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 FAT2Q9NYQ8 4349 aa7.08□□□□□ -1.28
SSBP1-212ENST00000489378 MAGEA13PA6NCF6 341 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 I3L521 148 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 J3QT63 122 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 IDH3BO43837 385 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 ZNF682O95780 498 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 SERPINA1P01009 418 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 IGHG4P01861 327 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 APOC1P02654 83 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 GYPBP06028 91 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 CDK2P24941 298 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 OPRL1P41146 370 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 HAAOP46952 286 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 ERVK11-1P61568 191 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 ESRRGP62508 458 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 VSNL1P62760 191 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 CBX1P83916 185 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 CYLC2Q14093 348 aaPredicted RBP7.07□□□□□ -1.28
SSBP1-212ENST00000489378 KIAA0141Q14154 515 aaPredicted RBP7.07□□□□□ -1.28
SSBP1-212ENST00000489378 HES1Q14469 280 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 RBM39Q14498 530 aaKnown RBP7.07□□□□□ -1.28
SSBP1-212ENST00000489378 KRTAP19-4Q3LI73 84 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 IFI44LQ53G44 452 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 TEX30Q5JUR7 227 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 PLCXD3Q63HM9 321 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 CCDC144NLQ6NUI1 221 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 KRT74Q7RTS7 529 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 OR8J3Q8NGG0 315 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 OR8B12Q8NGG6 310 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 OR52N4Q8NGI2 321 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 FAM81AQ8TBF8 368 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 MYOZ3Q8TDC0 251 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 ARPC1AQ92747 370 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 ABHD6Q9BV23 337 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 RABEP2Q9H5N1 569 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 CD300AQ9UGN4 299 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 ENPP4Q9Y6X5 453 aa7.07□□□□□ -1.28
SSBP1-212ENST00000489378 OOSP1A8MZH6 123 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms