RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 SERPINA2P20848 420 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 TUBG1P23258 451 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 MPGP29372 298 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 TNFSF10P50591 281 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 SNU13P55769 128 aaKnown RBP7.3□□□□□ -1.24
VTI1A-207ENST00000489357 ARF1P84077 181 aaKnown RBP7.3□□□□□ -1.24
VTI1A-207ENST00000489357 TGFBR3Q03167 851 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 PDZK1IP1Q13113 114 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 EXOSC2Q13868 293 aaKnown RBP7.3□□□□□ -1.24
VTI1A-207ENST00000489357 NKPD1Q17RQ9 610 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 CHRFAM7AQ494W8 412 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 ZNF766Q5HY98 468 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 LY6G6FQ5SQ64 297 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 SFRP5Q5T4F7 317 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 C1QTNF12Q5T7M4 302 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 OR52W1Q6IF63 320 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 LINC00696Q6ZRV3 163 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 Q6ZS49 121 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 OSR2Q8N2R0 312 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 ZADH2Q8N4Q0 377 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 GVQW1Q8N7I0 195 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 OR5L1Q8NGL2 311 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 AKR7LQ8NHP1 331 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 GTF3AQ92664 365 aaKnown RBP7.3□□□□□ -1.24
VTI1A-207ENST00000489357 MRGPRFQ96AM1 343 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 GMPPAQ96IJ6 420 aaPredicted RBP7.3□□□□□ -1.24
VTI1A-207ENST00000489357 SPACA5Q96QH8 159 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 NKX3-1Q99801 234 aaPredicted RBP7.3□□□□□ -1.24
VTI1A-207ENST00000489357 SLC6A15Q9H2J7 730 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 PPA2Q9H2U2 334 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 PLK3Q9H4B4 646 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 TUBG2Q9NRH3 451 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 OSGIN2Q9Y236 505 aa7.3□□□□□ -1.24
VTI1A-207ENST00000489357 TRBV6-7A0A0A0MS04 114 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 C5orf63A6NC05 138 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 OR5H14A6NHG9 310 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 SLC22A20A6NK97 555 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 OR5B21A6NL26 309 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 FAM166BA8MTA8 275 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 J3QKU1 62 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 TSC22D2O75157 780 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 SFT2D2O95562 160 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 MPC2O95563 127 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 CXCL2P19875 107 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 CHATP28329 748 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 UBA52P62987 128 aaKnown RBP7.29□□□□□ -1.24
VTI1A-207ENST00000489357 ARG2P78540 354 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 ZNF92Q03936 586 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 HGFACQ04756 655 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 MRPL49Q13405 166 aaKnown RBP7.29□□□□□ -1.24
VTI1A-207ENST00000489357 PPP1R1AQ13522 171 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 MPV17LQ2QL34 196 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 CEACAM21Q3KPI0 293 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 FBXW9Q5XUX1 488 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 ZNF324BQ6AW86 544 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-207ENST00000489357 TMEM211Q6ICI0 200 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 C11orf87Q6NUJ2 197 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 DHRS11Q6UWP2 260 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 GSG1LQ6UXU4 331 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 TMUB2Q71RG4 321 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 MRPL21Q7Z2W9 205 aaKnown RBP7.29□□□□□ -1.24
VTI1A-207ENST00000489357 NUFIP2Q7Z417 695 aaKnown RBP7.29□□□□□ -1.24
VTI1A-207ENST00000489357 C1QL2Q7Z5L3 287 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 TUSC5Q8IXB3 177 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 OR5A2Q8NGI9 324 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 THAP6Q8TBB0 222 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 FNDC9Q8TBE3 224 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 SCARB1Q8WTV0 552 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 WDYHV1Q96HA8 205 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 PDCD10Q9BUL8 212 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 MFFQ9GZY8 342 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 RIMS4Q9H426 269 aaPredicted RBP7.29□□□□□ -1.24
VTI1A-207ENST00000489357 SPACA1Q9HBV2 294 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 C12orf4Q9NQ89 552 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 GPR173Q9NS66 373 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 NECAP2Q9NVZ3 263 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 PLA2G3Q9NZ20 509 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 ANXA10Q9UJ72 324 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 C14orf166Q9Y224 244 aaKnown RBP7.29□□□□□ -1.24
VTI1A-207ENST00000489357 MPC1Q9Y5U8 109 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 SPENQ96T58 3664 aaKnown RBP7.29□□□□□ -1.24
VTI1A-207ENST00000489357 PCNX1Q96RV3 2341 aa7.29□□□□□ -1.24
VTI1A-207ENST00000489357 SETXQ7Z333 2677 aaKnown RBP7.28□□□□□ -1.24
VTI1A-207ENST00000489357 FXYD6-FXYD2A0A087WZ82 144 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 TRAV17A0A0B4J275 112 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 FAM230AA0A1W2PPH8 454 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 RPS10-NUDT3A0A1W2PQS6 291 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 PQLC2LA1A4F0 135 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 ARPC5O15511 151 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 PDCD6O75340 191 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 RAD51DO75771 328 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 HTR3BO95264 441 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 PMP2P02689 132 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 CTSDP07339 412 aaPredicted RBP7.28□□□□□ -1.24
VTI1A-207ENST00000489357 FUT3P21217 361 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 ANOS1P23352 680 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 APLNRP35414 380 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 UCP3P55916 312 aa7.28□□□□□ -1.24
VTI1A-207ENST00000489357 RBM11P57052 281 aaKnown RBP7.28□□□□□ -1.24
VTI1A-207ENST00000489357 ARPC4P59998 168 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms