RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 CMYA5Q8N3K9 4069 aa18.67■□□□□ 0.58
COL9A3-213ENST00000489045 RBP4P02753 201 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 CALCBP10092 127 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 PRKACAP17612 351 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 GABRR1P24046 479 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 DUSP1P28562 367 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 SNU13P55769 128 aaKnown RBP18.66■□□□□ 0.58
COL9A3-213ENST00000489045 ALKBH1Q13686 389 aaKnown RBP18.66■□□□□ 0.58
COL9A3-213ENST00000489045 GALEQ14376 348 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 ASPHD2Q6ICH7 369 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 ZNF676Q8N7Q3 588 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 OR52N4Q8NGI2 321 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 PPP1R35Q8TAP8 253 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 SPSB1Q96BD6 273 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 MRPL48Q96GC5 212 aaKnown RBP18.66■□□□□ 0.58
COL9A3-213ENST00000489045 CHST6Q9GZX3 395 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 SEBOXQ9HB31 216 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-213ENST00000489045 S100A14Q9HCY8 104 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 MYRFQ9Y2G1 1151 aa18.66■□□□□ 0.58
COL9A3-213ENST00000489045 KCNAB3O43448 404 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 MPZL2O60487 215 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 OCM2P0CE71 109 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 OCMP0CE72 109 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-213ENST00000489045 PEX2P28328 305 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 MEF2CQ06413 473 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-213ENST00000489045 PDZK1IP1Q13113 114 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 GRK1Q15835 563 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 CRIP3Q6Q6R5 217 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 TPRX1Q8N7U7 411 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 OR13C9Q8NGT0 318 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 OR13D1Q8NGV5 346 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 RHOXF1Q8NHV9 184 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 Q96MT0 163 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 ZNF714Q96N38 554 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 ISG20L2Q9H9L3 353 aaKnown RBP18.65■□□□□ 0.58
COL9A3-213ENST00000489045 AMBNQ9NP70 447 aa18.65■□□□□ 0.58
COL9A3-213ENST00000489045 hADV38S2A0JD32 116 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 FAM90A8PA6NJQ4 464 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 ODF3BA8MYP8 253 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 PSPNO60542 156 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 ARG1P05089 322 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 IGHV1-8P0DP01 117 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 GABRA5P31644 462 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 ZNF146Q15072 292 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 ZBTB49Q6ZSB9 765 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 RNF144BQ7Z419 303 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 DYNAPQ8N1N2 210 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 SYS1Q8N2H4 156 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 PQLC1Q8N2U9 271 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 SPACA5Q96QH8 159 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 MYCBPQ99417 103 aaPredicted RBP18.64■□□□□ 0.57
COL9A3-213ENST00000489045 FBLN5Q9UBX5 448 aa18.64■□□□□ 0.57
COL9A3-213ENST00000489045 TET2Q6N021 2002 aaPredicted RBP18.64■□□□□ 0.57
COL9A3-213ENST00000489045 NOTCH1P46531 2555 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 IGKV1-12A0A0C4DH73 117 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 LOC100130705A0A1B0GUX0 176 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 FADS2O95864 444 aaKnown RBP18.63■□□□□ 0.57
COL9A3-213ENST00000489045 IGKV1D-12P01611 117 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 MT-ND2P03891 347 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 PLA1AQ53H76 456 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 SPIN3Q5JUX0 258 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 ZNF626Q68DY1 528 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 OR4S1Q8NGB4 309 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 OR11H6Q8NGC7 330 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 OR5D18Q8NGL1 313 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 OR4C13Q8NGP0 309 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 PIFOQ8TCI5 191 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 MMP27Q9H306 513 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 HMG20AQ9NP66 347 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 RAB18Q9NP72 206 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 ERVK13-1Q9NX77 482 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 SIGLEC9Q9Y336 463 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 TBL2Q9Y4P3 447 aaKnown RBP18.63■□□□□ 0.57
COL9A3-213ENST00000489045 LINC00312Q9Y6C7 94 aa18.63■□□□□ 0.57
COL9A3-213ENST00000489045 SIRPB1O00241 398 aa18.62■□□□□ 0.57
COL9A3-213ENST00000489045 CHST1O43916 411 aa18.62■□□□□ 0.57
COL9A3-213ENST00000489045 OR3A1P47881 315 aa18.62■□□□□ 0.57
COL9A3-213ENST00000489045 RAB40BQ12829 278 aa18.62■□□□□ 0.57
COL9A3-213ENST00000489045 FOXRED1Q96CU9 486 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-213ENST00000489045 ZNF649Q9BS31 505 aa18.62■□□□□ 0.57
COL9A3-213ENST00000489045 INPP5EQ9NRR6 644 aa18.62■□□□□ 0.57
COL9A3-213ENST00000489045 FAM118AQ9NWS6 357 aa18.62■□□□□ 0.57
COL9A3-213ENST00000489045 GLS2Q9UI32 602 aa18.62■□□□□ 0.57
COL9A3-213ENST00000489045 GSTK1Q9Y2Q3 226 aa18.62■□□□□ 0.57
COL9A3-213ENST00000489045 E9PI62 339 aa18.61■□□□□ 0.57
COL9A3-213ENST00000489045 EBAG9O00559 213 aa18.61■□□□□ 0.57
COL9A3-213ENST00000489045 MGST3O14880 152 aa18.61■□□□□ 0.57
COL9A3-213ENST00000489045 KDM4BO94953 1096 aa18.61■□□□□ 0.57
COL9A3-213ENST00000489045 DYNC1I2Q13409 638 aaKnown RBP18.61■□□□□ 0.57
COL9A3-213ENST00000489045 LDLRAD2Q5SZI1 272 aa18.61■□□□□ 0.57
COL9A3-213ENST00000489045 LIAT1Q6ZQX7 453 aa18.61■□□□□ 0.57
COL9A3-213ENST00000489045 OR52I1Q8NGK6 324 aa18.61■□□□□ 0.57
COL9A3-213ENST00000489045 APH1BQ8WW43 257 aa18.61■□□□□ 0.57
COL9A3-213ENST00000489045 ZCCHC4Q9H5U6 513 aa18.61■□□□□ 0.57
COL9A3-213ENST00000489045 RANBP3Q9H6Z4 567 aaPredicted RBP18.61■□□□□ 0.57
COL9A3-213ENST00000489045 NEK6Q9HC98 313 aa18.61■□□□□ 0.57
COL9A3-213ENST00000489045 EXOSC4Q9NPD3 245 aaKnown RBP18.61■□□□□ 0.57
COL9A3-213ENST00000489045 KIAA2026Q5HYC2 2103 aa18.61■□□□□ 0.57
COL9A3-213ENST00000489045 MEGF11A6BM72 1044 aa18.6■□□□□ 0.57
COL9A3-213ENST00000489045 VGLL3A8MV65 326 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms