RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 IGHA1P01876 353 aa14.79□□□□□ -0.04
HDAC6-231ENST00000488905 AZGP1P25311 298 aaKnown RBP14.79□□□□□ -0.04
HDAC6-231ENST00000488905 PEX2P28328 305 aa14.79□□□□□ -0.04
HDAC6-231ENST00000488905 BLCAPP62952 87 aa14.79□□□□□ -0.04
HDAC6-231ENST00000488905 ZNF91Q05481 1191 aa14.79□□□□□ -0.04
HDAC6-231ENST00000488905 GRK1Q15835 563 aa14.79□□□□□ -0.04
HDAC6-231ENST00000488905 EGFL6Q8IUX8 553 aa14.79□□□□□ -0.04
HDAC6-231ENST00000488905 CCDC54Q8NEL0 328 aa14.79□□□□□ -0.04
HDAC6-231ENST00000488905 CHST6Q9GZX3 395 aa14.79□□□□□ -0.04
HDAC6-231ENST00000488905 TMEM133Q9H2Q1 129 aa14.79□□□□□ -0.04
HDAC6-231ENST00000488905 WARS2Q9UGM6 360 aaKnown RBP14.79□□□□□ -0.04
HDAC6-231ENST00000488905 KMT2CQ8NEZ4 4911 aaKnown RBP14.78□□□□□ -0.04
HDAC6-231ENST00000488905 LOC107986453A0A1B0GWG9 222 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 A0A1W2PQL4 384 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-231ENST00000488905 METTL15A6NJ78 407 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 PSPNO60542 156 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 ALX3O95076 343 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 APOL3O95236 402 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 OR2T7P0C7T2 308 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 GABRR1P24046 479 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 LOXL3P58215 753 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 KDM4DQ6B0I6 523 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 ZBTB49Q6ZSB9 765 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 ENTHD1Q8IYW4 607 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 OR52N4Q8NGI2 321 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 SLC7A6OSQ96CW6 309 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-231ENST00000488905 CLEC7AQ9BXN2 247 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 GABARAPL1Q9H0R8 117 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 SEBOXQ9HB31 216 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-231ENST00000488905 RBFOX1Q9NWB1 397 aaKnown RBP14.78□□□□□ -0.04
HDAC6-231ENST00000488905 DNAH9Q9NYC9 4486 aa14.78□□□□□ -0.04
HDAC6-231ENST00000488905 TRBV2A0A0J9YWF9 115 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 FAM90A22PA8MWA6 464 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 G3V2T6 193 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 SULT1C4O75897 302 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 UBCP0CG48 685 aaKnown RBP14.77□□□□□ -0.05
HDAC6-231ENST00000488905 HTR1FP30939 366 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 IL18R1Q13478 541 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 ATP6AP1Q15904 470 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 PRSS35Q8N3Z0 413 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 OR10H4Q8NGA5 316 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 OR4P4Q8NGL7 312 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 PP6455Q8WZ26 134 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 C10orf35Q96D05 121 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 OCSTAMPQ9BR26 566 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 ADI1Q9BV57 179 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 ENOPH1Q9UHY7 261 aa14.77□□□□□ -0.05
HDAC6-231ENST00000488905 A0A1W2PRX2 142 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 MGST3O14880 152 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 SERPINA3P01011 423 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 CD33P20138 364 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 BCL3P20749 454 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 HTR1DP28221 377 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 DUSP1P28562 367 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 NPBWR2P48146 333 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 POU3F4P49335 361 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 RBP2P50120 134 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 ZNF146Q15072 292 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 SPIN3Q5JUX0 258 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 C16orf82Q7Z2V1 217 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 TRAPPC6BQ86SZ2 158 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 FAM58AQ8N1B3 248 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 DNAAF1Q8NEP3 725 aa14.76□□□□□ -0.05
HDAC6-231ENST00000488905 ENTPD6O75354 484 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 MMP23AO75900 390 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 CYB5AP00167 134 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 PRKACAP17612 351 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 KIR3DL2P43630 455 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 OR3A1P47881 315 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 ATP1B3P54709 279 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 P2RX3P56373 397 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 ISL1P61371 349 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 CD83Q01151 205 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 FOXB2Q5VYV0 432 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 FAM220AQ7Z4H9 259 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 ZDHHC13Q8IUH4 622 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 OR5AU1Q8NGC0 362 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 CIB1Q99828 191 aa14.75□□□□□ -0.05
HDAC6-231ENST00000488905 UBE2J1Q9Y385 318 aaPredicted RBP14.75□□□□□ -0.05
HDAC6-231ENST00000488905 IGKV1-9A0A0C4DH69 117 aa14.74□□□□□ -0.05
HDAC6-231ENST00000488905 H3BUI4 141 aa14.74□□□□□ -0.05
HDAC6-231ENST00000488905 PF4V1P10720 104 aa14.74□□□□□ -0.05
HDAC6-231ENST00000488905 IGLL1P15814 213 aa14.74□□□□□ -0.05
HDAC6-231ENST00000488905 ERP29P30040 261 aaKnown RBP14.74□□□□□ -0.05
HDAC6-231ENST00000488905 SNU13P55769 128 aaKnown RBP14.74□□□□□ -0.05
HDAC6-231ENST00000488905 PRAMEF5Q5TYX0 476 aa14.74□□□□□ -0.05
HDAC6-231ENST00000488905 ADAT3Q96EY9 351 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-231ENST00000488905 AKR1E2Q96JD6 320 aa14.74□□□□□ -0.05
HDAC6-231ENST00000488905 GAL3ST2Q9H3Q3 398 aa14.74□□□□□ -0.05
HDAC6-231ENST00000488905 LIN7BQ9HAP6 207 aa14.74□□□□□ -0.05
HDAC6-231ENST00000488905 GNG8Q9UK08 70 aa14.74□□□□□ -0.05
HDAC6-231ENST00000488905 SIRPB1O00241 398 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 CALCBP10092 127 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 ATP6V1E1P36543 226 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 MTCP1P56278 107 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 CDC42P60953 191 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 BDH1Q02338 343 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 TP53I3Q53FA7 332 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 BAIAP2L2Q6UXY1 529 aa14.73□□□□□ -0.05
HDAC6-231ENST00000488905 LHFPL2Q6ZUX7 228 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms