RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 MMP24Q9Y5R2 645 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 TMEM82A0PJX8 343 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 POM121CA8CG34 1229 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 MT-ND2P03891 347 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 GABRR1P24046 479 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 DUSP1P28562 367 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 BMXP51813 675 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 ERVFRD-1P60508 538 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 PDZK1IP1Q13113 114 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 KLHL22Q53GT1 634 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 RNF144BQ7Z419 303 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 FAM58AQ8N1B3 248 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 WFDC12Q8WWY7 111 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 JAM3Q9BX67 310 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 CHST6Q9GZX3 395 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 ZCCHC4Q9H5U6 513 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 BEX1Q9HBH7 125 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 FGF20Q9NP95 211 aaPredicted RBP14.47□□□□□ -0.09
ITGB1-215ENST00000488494 DHDHQ9UQ10 334 aa14.47□□□□□ -0.09
ITGB1-215ENST00000488494 IGKV1-12A0A0C4DH73 117 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 hCG_1809904A0A1W2PP81 198 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 A0A1W2PPE2 198 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 A0A1W2PR64 198 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 A0A1W2PRV1 198 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 IGKV1D-12P01611 117 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 HCKP08631 526 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 ETV1P50549 477 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 DLX6P56179 175 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 GRK1Q15835 563 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 SPIN3Q5JUX0 258 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 C17orf107Q6ZR85 190 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 TCF23Q7RTU1 214 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 C11orf42Q8N5U0 333 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 PACRGLQ8N7B6 248 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 HEXA-AS1Q9H8Q6 139 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 C8orf4Q9NR00 106 aa14.46□□□□□ -0.09
ITGB1-215ENST00000488494 MEGF8Q7Z7M0 2845 aa14.46□□□□□ -0.1
ITGB1-215ENST00000488494 A0A1B0GUS0 222 aa14.45□□□□□ -0.1
ITGB1-215ENST00000488494 SULT1B1O43704 296 aa14.45□□□□□ -0.1
ITGB1-215ENST00000488494 PSPNO60542 156 aa14.45□□□□□ -0.1
ITGB1-215ENST00000488494 RPSAP08865 295 aaKnown RBP14.45□□□□□ -0.1
ITGB1-215ENST00000488494 GTF2A1P52655 376 aaPredicted RBP14.45□□□□□ -0.1
ITGB1-215ENST00000488494 ZNF146Q15072 292 aa14.45□□□□□ -0.1
ITGB1-215ENST00000488494 XAF1Q6GPH4 301 aa14.45□□□□□ -0.1
ITGB1-215ENST00000488494 DHRS7BQ6IAN0 325 aaPredicted RBP14.45□□□□□ -0.1
ITGB1-215ENST00000488494 GDPGP1Q6ZNW5 385 aa14.45□□□□□ -0.1
ITGB1-215ENST00000488494 BEND2Q8NDZ0 799 aa14.45□□□□□ -0.1
ITGB1-215ENST00000488494 OR5R1Q8NH85 324 aa14.45□□□□□ -0.1
ITGB1-215ENST00000488494 HAVCR2Q8TDQ0 301 aa14.45□□□□□ -0.1
ITGB1-215ENST00000488494 RGP1Q92546 391 aaPredicted RBP14.45□□□□□ -0.1
ITGB1-215ENST00000488494 AJUBAQ96IF1 538 aa14.45□□□□□ -0.1
ITGB1-215ENST00000488494 SNX22Q96L94 193 aa14.45□□□□□ -0.1
ITGB1-215ENST00000488494 HMG20AQ9NP66 347 aa14.45□□□□□ -0.1
ITGB1-215ENST00000488494 MGAM2Q2M2H8 2515 aa14.45□□□□□ -0.1
ITGB1-215ENST00000488494 H3BUX3 64 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 SIRPB1O00241 398 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 KDM4BO94953 1096 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 ZNF728P0DKX0 622 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 PAX6P26367 422 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 DCKP27707 260 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 OR3A1P47881 315 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 CDK5R1Q15078 307 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 OR2G6Q5TZ20 316 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 TTC23Q5W5X9 447 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 OLFML2AQ68BL7 652 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 CRIP3Q6Q6R5 217 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 PARP16Q8N5Y8 322 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 TPRX1Q8N7U7 411 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 SETD9Q8NE22 299 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 OR52N4Q8NGI2 321 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 SLITRK2Q9H156 845 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 EXOSC4Q9NPD3 245 aaKnown RBP14.44□□□□□ -0.1
ITGB1-215ENST00000488494 GLS2Q9UI32 602 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 GSTK1Q9Y2Q3 226 aa14.44□□□□□ -0.1
ITGB1-215ENST00000488494 IRGMA1A4Y4 181 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 CLPSL1A2RUU4 121 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 C17orf98A8MV24 154 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 ANKRD65E5RJM6 399 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 RBP4P02753 201 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 MYL12AP19105 171 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 SOX2P48431 317 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 ADARB1P78563 741 aaKnown RBP14.43□□□□□ -0.1
ITGB1-215ENST00000488494 SRSF4Q08170 494 aaKnown RBP14.43□□□□□ -0.1
ITGB1-215ENST00000488494 IL18R1Q13478 541 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 PRR31Q5SQ13 230 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 TMPRSS11AQ6ZMR5 421 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 SERPINA12Q8IW75 414 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 SAXO1Q8IYX7 474 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 DHRSXQ8N5I4 330 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 ZSCAN4Q8NAM6 433 aaPredicted RBP14.43□□□□□ -0.1
ITGB1-215ENST00000488494 OR4S1Q8NGB4 309 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 OR5D14Q8NGL3 314 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 ZNF714Q96N38 554 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 SEBOXQ9HB31 216 aaPredicted RBP14.43□□□□□ -0.1
ITGB1-215ENST00000488494 DIMT1Q9UNQ2 313 aaKnown RBP14.43□□□□□ -0.1
ITGB1-215ENST00000488494 PCDHGB5Q9Y5G0 923 aa14.43□□□□□ -0.1
ITGB1-215ENST00000488494 hADV38S2A0JD32 116 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 MGST3O14880 152 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 OR2H2O95918 312 aa14.42□□□□□ -0.1
ITGB1-215ENST00000488494 IGHV1-8P0DP01 117 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms