RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 A0A0U1RQK1 487 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 EFCAB10A6NFE3 127 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 HOXA3O43365 443 aaPredicted RBP11.62□□□□□ -0.55
COL9A2-208ENST00000488463 SULT1B1O43704 296 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 ANGPTL7O43827 346 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 KDM4BO94953 1096 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 CHRM2P08172 466 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 MELTFP08582 738 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 C21orf33P30042 268 aaPredicted RBP11.62□□□□□ -0.55
COL9A2-208ENST00000488463 POU3F4P49335 361 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 RPL31P62899 125 aaKnown RBP11.62□□□□□ -0.55
COL9A2-208ENST00000488463 ZNF273Q14593 569 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 TCF23Q7RTU1 214 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 MKXQ8IYA7 352 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 Q8IYB0 196 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 CMTM4Q8IZR5 234 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 FAM58AQ8N1B3 248 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 OR51A2Q8NGJ7 313 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 OR5D14Q8NGL3 314 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 EMG1Q92979 244 aaKnown RBP11.62□□□□□ -0.55
COL9A2-208ENST00000488463 SMIM19Q96E16 107 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 PGLYRP3Q96LB9 341 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 METTL8Q9H825 291 aaKnown RBP11.62□□□□□ -0.55
COL9A2-208ENST00000488463 ZMAT3Q9HA38 289 aaKnown RBP11.62□□□□□ -0.55
COL9A2-208ENST00000488463 HMG20AQ9NP66 347 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 NOX4Q9NPH5 578 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 DHDHQ9UQ10 334 aa11.62□□□□□ -0.55
COL9A2-208ENST00000488463 TRBV5-5A0A0J9YX44 114 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 A0A1W2PQ09 198 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 DENRO43583 198 aaKnown RBP11.61□□□□□ -0.55
COL9A2-208ENST00000488463 HKR1P10072 659 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 MYL12AP19105 171 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 CAPZA1P52907 286 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 ERVFRD-1P60508 538 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 KISS1Q15726 138 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 LDLRAD3Q86YD5 345 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 SAXO1Q8IYX7 474 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 FAM185AQ8N0U4 392 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 OR8H2Q8N162 312 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 PNKDQ8N490 385 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 OR4M1Q8NGD0 313 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 OR52N4Q8NGI2 321 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 OR5D18Q8NGL1 313 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 OR13C5Q8NGS8 318 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 GPR148Q8TDV2 347 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 GHSRQ92847 366 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 ANKRD60Q9BZ19 345 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 LRRC42Q9Y546 428 aa11.61□□□□□ -0.55
COL9A2-208ENST00000488463 PSPNO60542 156 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 HAND1O96004 215 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 CALCBP10092 127 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 CCL3L1P16619 93 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 MYF6P23409 242 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 DUSP1P28562 367 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 SOX2P48431 317 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 UBE2E1P51965 193 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 ASCL4Q6XD76 172 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 AHSA2Q719I0 299 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 ZFP41Q8N8Y5 198 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 ZSCAN4Q8NAM6 433 aaPredicted RBP11.6□□□□□ -0.55
COL9A2-208ENST00000488463 BPIFB6Q8NFQ5 453 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 TSEN15Q8WW01 171 aaKnown RBP11.6□□□□□ -0.55
COL9A2-208ENST00000488463 SGCDQ92629 289 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 TAF15Q92804 592 aaKnown RBP eCLIP11.6□□□□□ -0.55
COL9A2-208ENST00000488463 TMEM106AQ96A25 262 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 ORAI1Q96D31 301 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 SNX22Q96L94 193 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 CNBD2Q96M20 576 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 PAK1IP1Q9NWT1 392 aaPredicted RBP11.6□□□□□ -0.55
COL9A2-208ENST00000488463 SCN3BQ9NY72 215 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 TAS2R4Q9NYW5 299 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 ZNF281Q9Y2X9 895 aa11.6□□□□□ -0.55
COL9A2-208ENST00000488463 C17orf98A8MV24 154 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 NPFFO15130 113 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 PRKACAP17612 351 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 IGFBP3P17936 291 aaPredicted RBP11.59□□□□□ -0.55
COL9A2-208ENST00000488463 LMO1P25800 156 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 OR3A1P47881 315 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 ACTG1P63261 375 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 SPIN3Q5JUX0 258 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 C6orf141Q5SZD1 244 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 RNLSQ5VYX0 342 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 Q6P435 159 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 TMEM86BQ8N661 226 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 NANOGP1Q8N7R0 232 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 ASCC1Q8N9N2 400 aaKnown RBP11.59□□□□□ -0.55
COL9A2-208ENST00000488463 Q8NFD4 153 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 OR4S1Q8NGB4 309 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 GCDHQ92947 438 aaPredicted RBP11.59□□□□□ -0.55
COL9A2-208ENST00000488463 SLC25A28Q96A46 364 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 CHIAQ9BZP6 476 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 RHOFQ9HBH0 211 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 BLOC1S6Q9UL45 172 aa11.59□□□□□ -0.55
COL9A2-208ENST00000488463 TRBV5-7A0A0A0MS05 114 aa11.58□□□□□ -0.56
COL9A2-208ENST00000488463 GABRPO00591 440 aa11.58□□□□□ -0.56
COL9A2-208ENST00000488463 GPX5O75715 221 aa11.58□□□□□ -0.56
COL9A2-208ENST00000488463 CYB5AP00167 134 aa11.58□□□□□ -0.56
COL9A2-208ENST00000488463 ALDOBP05062 364 aa11.58□□□□□ -0.56
COL9A2-208ENST00000488463 CD1AP06126 327 aa11.58□□□□□ -0.56
COL9A2-208ENST00000488463 CDK1P06493 297 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms