RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 SSX2Q16385 188 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 TMEM244Q5VVB8 128 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 LHFPL3Q86UP9 236 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 C1QL4Q86Z23 238 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 OR8H2Q8N162 312 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 CBR4Q8N4T8 237 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 OR52N4Q8NGI2 321 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 OR51A4Q8NGJ6 313 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 OR5D18Q8NGL1 313 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 TRUB1Q8WWH5 349 aaKnown RBP9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 SNX22Q96L94 193 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 MMP27Q9H306 513 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 AMBNQ9NP70 447 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 ING3Q9NXR8 418 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 FBLN5Q9UBX5 448 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 GMPPBQ9Y5P6 360 aa9.16□□□□□ -0.94
NIPAL3-207ENST00000488155 TGP01266 2768 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 SLC16A6O15403 523 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 CYB5AP00167 134 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 IGHV1-8P0DP01 117 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 VSIG10L2P0DP72 767 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 PEX2P28328 305 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 ALDH3A2P51648 485 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 SNRPGP62308 76 aaKnown RBP9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 ACTC1P68032 377 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 ACTA1P68133 377 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 ZNF91Q05481 1191 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 SCN1BQ07699 218 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 HABP2Q14520 560 aaPredicted RBP9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 LDLRAD2Q5SZI1 272 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 CRIP3Q6Q6R5 217 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 TCF23Q7RTU1 214 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 TMEM219Q86XT9 240 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 FAM58AQ8N1B3 248 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 ACBD7Q8N6N7 88 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 CCDC54Q8NEL0 328 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 OR4S1Q8NGB4 309 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 OR4C13Q8NGP0 309 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 OR13C9Q8NGT0 318 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 OR13D1Q8NGV5 346 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 PIFOQ8TCI5 191 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 PP6455Q8WZ26 134 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 PELI1Q96FA3 418 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 C4orf36Q96KX1 117 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 ZNF714Q96N38 554 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 OPALINQ96PE5 141 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 MBOAT4Q96T53 435 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 NKX1-2Q9UD57 310 aaPredicted RBP9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 GSTK1Q9Y2Q3 226 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 HILPDAQ9Y5L2 63 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 MEGF8Q7Z7M0 2845 aa9.15□□□□□ -0.94
NIPAL3-207ENST00000488155 IGKV1-12A0A0C4DH73 117 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 MEGF11A6BM72 1044 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 FAM172BPA6NC97 362 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 J3QRE1 110 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 PSPNO60542 156 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 MMP23AO75900 390 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 IGKV1D-12P01611 117 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 CSF1P09603 554 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 PRKACBP22694 351 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 KIR2DS4P43632 304 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 EFNB2P52799 333 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 ACTA2P62736 377 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 ACTG2P63267 376 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 ALKBH1Q13686 389 aaKnown RBP9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 OCLNQ16625 522 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 PDLIM3Q53GG5 364 aaPredicted RBP9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 MEDAGQ5VYS4 303 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 CCBE1Q6UXH8 406 aaPredicted RBP9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 Q6ZTK2 550 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 LHFPL2Q6ZUX7 228 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 TRAPPC6BQ86SZ2 158 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 LYG1Q8N1E2 194 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 PQLC1Q8N2U9 271 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 KLHDC1Q8N7A1 406 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 ZNF676Q8N7Q3 588 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 DNAAF1Q8NEP3 725 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 OR13C3Q8NGS6 347 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 OR2T6Q8NHC8 308 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 C10orf35Q96D05 121 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 LGALS12Q96DT0 336 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 SLC29A1Q99808 456 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 ALG8Q9BVK2 526 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 ISG20L2Q9H9L3 353 aaKnown RBP9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 NEK6Q9HC98 313 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 ABCB10Q9NRK6 738 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 HHLA2Q9UM44 414 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 MYRFQ9Y2G1 1151 aa9.14□□□□□ -0.95
NIPAL3-207ENST00000488155 PRKDCP78527 4128 aaKnown RBP9.13□□□□□ -0.95
NIPAL3-207ENST00000488155 TRBV2A0A0J9YWF9 115 aa9.13□□□□□ -0.95
NIPAL3-207ENST00000488155 hADV38S2A0JD32 116 aa9.13□□□□□ -0.95
NIPAL3-207ENST00000488155 FAM90A8PA6NJQ4 464 aa9.13□□□□□ -0.95
NIPAL3-207ENST00000488155 SNTNA6NMZ2 147 aa9.13□□□□□ -0.95
NIPAL3-207ENST00000488155 OR4C45A6NMZ5 311 aa9.13□□□□□ -0.95
NIPAL3-207ENST00000488155 ODF3BA8MYP8 253 aa9.13□□□□□ -0.95
NIPAL3-207ENST00000488155 MEF2CQ06413 473 aaPredicted RBP9.13□□□□□ -0.95
NIPAL3-207ENST00000488155 PDZK1IP1Q13113 114 aa9.13□□□□□ -0.95
NIPAL3-207ENST00000488155 HERPUD1Q15011 391 aa9.13□□□□□ -0.95
NIPAL3-207ENST00000488155 SLC25A30Q5SVS4 291 aa9.13□□□□□ -0.95
NIPAL3-207ENST00000488155 ZNF626Q68DY1 528 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms