RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 FBXO36Q8NEA4 188 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 OR10Z1Q8NGY1 313 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 OR1L1Q8NH94 360 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 RNASE11Q8TAA1 199 aaKnown RBP1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 KCTD4Q8WVF5 259 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 BAALCQ8WXS3 180 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 OR8D1Q8WZ84 308 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 TOP1MTQ969P6 601 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 CCDC127Q96BQ5 260 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 FAM19A4Q96LR4 140 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 UBE2E2Q96LR5 201 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 C18orf15Q96N68 181 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF2Q9BSG1 426 aaPredicted RBP1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 SFXN3Q9BWM7 321 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF717Q9BY31 904 aaPredicted RBP1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 ARMC7Q9H6L4 198 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 LRRC19Q9H756 370 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 FBXO8Q9NRD0 319 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 INIPQ9NRY2 104 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 PARVAQ9NVD7 372 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 RBFOX1Q9NWB1 397 aaKnown RBP1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 TAS2R7Q9NYW3 318 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 TAS2R1Q9NYW7 299 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 HMGXB4Q9UGU5 601 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 GLS2Q9UI32 602 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 SIGLEC7Q9Y286 467 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 SIGLEC9Q9Y336 463 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 UTP11Q9Y3A2 253 aaKnown RBP1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 ATP7BP35670 1465 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 MBD5Q9P267 1494 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 KDM5AP29375 1690 aaKnown RBP1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 PPRC1Q5VV67 1664 aaKnown RBP1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 ADGBQ8N7X0 1667 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 NUP214P35658 2090 aaPredicted RBP1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 OVOS2A0A0G2JMS6 1433 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 OVOS2A0A0J9YW53 1432 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 OVOS2Q6IE36 1432 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 ABCA9Q8IUA7 1624 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 RNF17Q9BXT8 1623 aaKnown RBP1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 BIVM-ERCC5R4GMW8 1640 aa1.98□□□□□ -2.09
SNRNP27-204ENST00000487029 UGGT2Q9NYU1 1516 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 MAP3K19Q56UN5 1328 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 MED14O60244 1454 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 LOC100653049A0A140TA62 436 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 ISPDA4D126 451 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 I3L4J1 428 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 M0R1X1 148 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 PSPHP1O15172 72 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 ACOX3O15254 700 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 SPOPO43791 374 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 KRT34O76011 436 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 PLEKHA8P1O95397 391 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 SNAP29O95721 258 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 TTC4O95801 387 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 CYB5R3P00387 301 aaPredicted RBP1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 GCGP01275 180 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 APOC1P02654 83 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 IL6P05231 212 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 SNRPAP09012 282 aaKnown RBP1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 CPN2P22792 545 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 CXCR1P25024 350 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 ERFP50548 548 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 CDK9P50750 372 aaKnown RBP1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 DEFA1P59665 94 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 DEFA3P59666 94 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 MAGOHP61326 146 aaKnown RBP1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 NCALDP61601 193 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 TSPAN5P62079 268 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 PAFAH1B2P68402 229 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF616Q08AN1 781 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 BAMBIQ13145 260 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 DMC1Q14565 340 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 ANGPT1Q15389 498 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 SHHQ15465 462 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 C6orf99Q4VX62 202 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 KLHL12Q53G59 568 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 FBXO48Q5FWF7 155 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 TNFAIP8L3Q5GJ75 292 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 FAM222AQ5U5X8 452 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 MFSD14CQ5VZR4 134 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 TMEM236Q5W0B7 351 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 STEAP4Q687X5 459 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 C3orf33Q6P1S2 294 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 Q6ZSR6 202 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF767PQ75MW2 155 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 SETD3Q86TU7 594 aaPredicted RBP1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 BBS7Q8IWZ6 715 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 STX19Q8N4C7 294 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 TBC1D19Q8N5T2 526 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 ASCC1Q8N9N2 400 aaKnown RBP1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 SPANXA2-OT1Q8N9U9 137 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 OR51L1Q8NGJ5 315 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 OR52K1Q8NGK4 314 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 OR8K3Q8NH51 312 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 LHFPL5Q8TAF8 219 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF420Q8TAQ5 688 aaPredicted RBP1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 LRRC20Q8TCA0 184 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 RXFP2Q8WXD0 754 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 MAGOHBQ96A72 148 aaKnown RBP1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 TAMM41Q96BW9 452 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms