RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 SMIM11AP58511 58 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 RPL24P83731 157 aaKnown RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 ZNF92Q03936 586 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 LIPEQ05469 1076 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 ACSM1Q08AH1 577 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 MICBQ29980 383 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 DRAM2Q6UX65 266 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 ZNF826PQ6ZT77 177 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC36A1Q7Z2H8 476 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 LINC00346Q8IVM7 164 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 C11orf53Q8IXP5 236 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 PDZD9Q8IXQ8 264 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 OR4C15Q8NGM1 316 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 OR4K13Q8NH42 304 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 OR2AE1Q8NHA4 323 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 C8orf46Q8TAG6 207 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 FCAMRQ8WWV6 532 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 TMEM190Q8WZ59 177 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 ST8SIA4Q92187 359 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 TNFRSF14Q92956 283 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 SPTSSAQ969W0 71 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 C12orf43Q96C57 262 aaKnown RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 ST6GAL2Q96JF0 529 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 C7orf34Q96L11 122 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 ERMAPQ96PL5 475 aaPredicted RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 NMNAT3Q96T66 252 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 HOPXQ9BPY8 73 aaPredicted RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 PYGO2Q9BRQ0 406 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 FUZQ9BT04 418 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 DCTN5Q9BTE1 182 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 ADAT1Q9BUB4 502 aaKnown RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 DNTTIP1Q9H147 329 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 OPA3Q9H6K4 179 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 RPRD1BQ9NQG5 326 aaKnown RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 MRPL22Q9NWU5 206 aaKnown RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 PEMTQ9UBM1 199 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 PRPF19Q9UMS4 504 aaKnown RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 FAM32AQ9Y421 112 aaKnown RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 DSCAML1Q8TD84 2053 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 IGHV3OR15-7A0A075B7D8 119 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 TRBV4-1A0A0J9YWV2 114 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 hCG_1807616A0A1W2PRN6 198 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 ANKRD30BLA7E2S9 258 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 G3V4G9 280 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 M0R1W7 72 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 NME4O00746 187 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 PIN1P1O15428 100 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 XRCC2O43543 280 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 PAHP00439 452 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 AZU1P20160 251 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 GABRA5P31644 462 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 SAA4P35542 130 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC15A1P46059 708 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 GSSP48637 474 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 GSK3BP49841 420 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 UBE2E1P51965 193 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 EFNB2P52799 333 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 EMX1Q04741 257 aaPredicted RBP3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 KRT72Q14CN4 511 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 FAM189A2Q15884 450 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 SNCBQ16143 134 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 AANATQ16613 207 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 PCK2Q16822 640 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 SNAI3Q3KNW1 292 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 LRRC10Q5BKY1 277 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 FGD3Q5JSP0 725 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 WDR38Q5JTN6 314 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 TEX30Q5JUR7 227 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 GLYATL3Q5SZD4 288 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 SERTAD4-AS1Q5TG53 156 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 NCR3LG1Q68D85 454 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 WDR82Q6UXN9 313 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 HACD2Q6Y1H2 254 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 DPY19L4Q7Z388 723 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 FGFRL1Q8N441 504 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 Q8N7P7 452 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 CYB561A3Q8NBI2 242 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 OR1M1Q8NGA1 313 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 OR56B2PQ8NGI1 322 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 OR9Q1Q8NGQ5 310 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 OR10Z1Q8NGY1 313 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 OR2T4Q8NH00 348 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 OR8S1Q8NH09 359 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 OR52J3Q8NH60 311 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 FANK1Q8TC84 345 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 LRRC29Q8WV35 223 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 FAM162AQ96A26 154 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 RCN3Q96D15 328 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 DDOQ99489 341 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 CCL13Q99616 98 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 TLNRD1Q9H1K6 362 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 SEMA6AQ9H2E6 1030 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 PPA2Q9H2U2 334 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 OR52D1Q9H346 318 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 RANBP3Q9H6Z4 567 aaPredicted RBP3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 METTL8Q9H825 291 aaKnown RBP3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 SP140LQ9H930 580 aa3.18□□□□□ -1.9
SNRNP40-205ENST00000486941 EFCAB1Q9HAE3 211 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms